RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 CYB5R1Q9UHQ9 305 aa12.93□□□□□ -0.34
SPG7-213ENST00000566221 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
SPG7-213ENST00000566221 KLF2Q9Y5W3 355 aaPredicted RBP12.93□□□□□ -0.34
SPG7-213ENST00000566221 LHFPL6Q9Y693 200 aa12.93□□□□□ -0.34
SPG7-213ENST00000566221 TRIM64CA6NLI5 447 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 ZNF593O00488 134 aaPredicted RBP12.92□□□□□ -0.34
SPG7-213ENST00000566221 HLA-HP01893 362 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 CD79AP11912 226 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 ARR3P36575 388 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 SLC15A1P46059 708 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 SLC35A2P78381 396 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 SCRN3Q0VDG4 424 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 RAB40BQ12829 278 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 PPA1Q15181 289 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 GSG1Q2KHT4 349 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 OTPQ5XKR4 325 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 SLC18B1Q6NT16 456 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 ZNF773Q6PK81 442 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 DPY19L4Q7Z388 723 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 CDC20BQ86Y33 519 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 LINC00346Q8IVM7 164 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 SLC35F2Q8IXU6 374 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 WDR31Q8NA23 367 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 OR52N5Q8NH56 324 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 OTOSQ8NHW6 89 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 FBXO17Q96EF6 278 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 MED18Q9BUE0 208 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 RNF121Q9H920 327 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 AMBNQ9NP70 447 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
SPG7-213ENST00000566221 FKBP14Q9NWM8 211 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 NDRG3Q9UGV2 375 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 FBXL3Q9UKT7 428 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 PCDHGB1Q9Y5G3 927 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 SLC25A15Q9Y619 301 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 TMEM14AQ9Y6G1 99 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 ABCA12Q86UK0 2595 aa12.92□□□□□ -0.34
SPG7-213ENST00000566221 RTTNQ86VV8 2226 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 ZNF503-AS2A6NEH8 195 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 XPNPEP2O43895 674 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 APOL3O95236 402 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 RAB36O95755 333 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 FADS2O95864 444 aaKnown RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 MMP7P09237 267 aaPredicted RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 PSKH1P11801 424 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 ZNF32P17041 273 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 EEF1B2P24534 225 aaKnown RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 RPS27P42677 84 aaKnown RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 ACTC1P68032 377 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 ACTA1P68133 377 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 TUBA1BP68363 451 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 BLMHQ13867 455 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 TAB1Q15750 504 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 RNLSQ5VYX0 342 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 HIST2H2BCQ6DN03 193 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 TMEM154Q6P9G4 183 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 TUBA1AQ71U36 451 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 MDP1Q86V88 176 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 GJC3Q8NFK1 279 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 OR2H1Q9GZK4 316 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 VCX3AQ9NNX9 186 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 BATF3Q9NR55 127 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 B3GNT2Q9NY97 397 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 LAMP5Q9UJQ1 280 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 GDF2Q9UK05 429 aaPredicted RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 EXOGQ9Y2C4 368 aaKnown RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 TIMM10BQ9Y5J6 103 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 SNX5Q9Y5X3 404 aa12.91□□□□□ -0.34
SPG7-213ENST00000566221 USP9YO00507 2555 aaPredicted RBP12.91□□□□□ -0.34
SPG7-213ENST00000566221 ICE1Q9Y2F5 2266 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 A0A1W2PR80 420 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 PTGES3LE9PB15 166 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 PHYHO14832 338 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 SGCEO43556 437 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 RGS10O43665 173 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 CLPTM1O96005 669 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 OR2T7P0C7T2 308 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 RAB1AP62820 205 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 PIGFQ07326 219 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 EIF2B1Q14232 305 aaKnown RBP12.9□□□□□ -0.34
SPG7-213ENST00000566221 RAB35Q15286 201 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 CORO6Q6QEF8 472 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 HIST2H3AQ71DI3 136 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 PRSS48Q7RTY5 328 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 DCXRQ7Z4W1 244 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 FAM169BQ8N8A8 192 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 OR4F15Q8NGB8 312 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 OR2T27Q8NH04 317 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 FGFBP3Q8TAT2 258 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 COPS4Q9BT78 406 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 HDHD2Q9H0R4 259 aa12.9□□□□□ -0.34
SPG7-213ENST00000566221 C1orf198Q9H425 327 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms