RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 A0A087WYN8 130 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 TRDV1A0A1B0GX56 115 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 KRT87PA6NCN2 255 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 FABP12A6NFH5 140 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 GABRR3A8MPY1 467 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 B4DXG7 233 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 PCDH7O60245 1069 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 NGFP01138 241 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ANKRD34CP0C6C1 535 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 LAMP1P11279 417 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 FGF5P12034 268 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 MYL12AP19105 171 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 C4BPBP20851 252 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CCR7P32248 378 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ETV5P41161 510 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 RAG2P55895 527 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 SRP54P61011 504 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 PPP1R8Q12972 351 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 HEPACAMQ14CZ8 416 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 XKR6Q5GH73 641 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CD200R1LQ6Q8B3 271 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 WDR74Q6RFH5 385 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 FAM198BQ6UWH4 519 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 FAM131AQ6UXB0 335 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 BAIAP2L2Q6UXY1 529 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 TSEN54Q7Z6J9 526 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ASPGQ86U10 573 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 TRAM1L1Q8N609 369 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 AQP11Q8NBQ7 271 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 OR2AP1Q8NGE2 309 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 VANGL1Q8TAA9 524 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 OCC1Q8TAD7 63 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 OR5P2Q8WZ92 322 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 UFD1Q92890 307 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 PPCDCQ96CD2 204 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 PDXPQ96GD0 296 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 THOC3Q96J01 351 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 LURAP1Q96LR2 239 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 C7orf50Q9BRJ6 194 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 SLC35A5Q9BS91 424 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 NLNQ9BYT8 704 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 COPZ2Q9P299 210 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 PILRAQ9UKJ1 303 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 NUP50Q9UKX7 468 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 DOPEY2Q9Y3R5 2298 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 NUMA1Q14980 2115 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 C5orf58C9J3I9 102 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 RGS5O15539 181 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 GCM2O75603 506 aaPredicted RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 CEACAM4O75871 244 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 POP4O95707 220 aaKnown RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 H1F0P07305 194 aaKnown RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 TSPAN19P0C672 248 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 HSMCR30P0CW71 290 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 DAOP14920 347 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 CCKARP32238 428 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 CHI3L1P36222 383 aaPredicted RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 HSD17B2P37059 387 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 MNDAP41218 407 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 CRATP43155 626 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 XKP51811 444 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 ARFIP1P53367 373 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 CRYBA2P53672 197 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 WNT4P56705 351 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 DSTNP60981 165 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 TRA2BP62995 288 aaKnown RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 RASGEF1BQ0VAM2 473 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 GAGE2BQ13066 116 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 MRPL28Q13084 256 aaKnown RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 BAMBIQ13145 260 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 MFAP5Q13361 173 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 DOC2AQ14183 400 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF79Q15937 498 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 POM121L1PQ3SYA9 428 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 GAGE2EQ4V326 116 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 C6orf183Q5T699 404 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 FAM219BQ5XKK7 198 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 FAM71E1Q6IPT2 247 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 GAGE2AQ6NT46 116 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF730Q6ZMV8 503 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 IDO2Q6ZQW0 420 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 COMMD2Q86X83 199 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 PHC2Q8IXK0 858 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 NAGSQ8N159 534 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 OR10G6Q8NH81 332 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 SUN5Q8TC36 379 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 NEURL3Q96EH8 262 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 DHRS9Q9BPW9 319 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 RHNO1Q9BSD3 238 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 MARVELD1Q9BSK0 173 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 POLR2J2Q9GZM3 115 aaKnown RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 PIGUQ9H490 435 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 RANBP3Q9H6Z4 567 aaPredicted RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 UCK1Q9HA47 277 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 NMNAT1Q9HAN9 279 aaPredicted RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 EXOSC4Q9NPD3 245 aaKnown RBP3.65□□□□□ -1.82
LINC00561-201ENST00000565815 GAGE2DQ9UEU5 116 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 SLC22A14Q9Y267 594 aa3.65□□□□□ -1.82
LINC00561-201ENST00000565815 RBMX2Q9Y388 322 aaKnown RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms