RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PMPCAQ10713 525 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZFYVE21Q9BQ24 234 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TBX21Q9UL17 535 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SMIM10L1P0DMW3 83 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 DMWDQ09019 674 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CA13Q8N1Q1 262 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RRNAD1Q96FB5 475 aaKnown RBP18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SMIM10Q96HG1 83 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC41A2Q96JW4 573 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SEMA6CQ9H3T2 930 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PCNX3Q9H6A9 2034 aa18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KLF2Q9Y5W3 355 aaPredicted RBP18.47■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TRBV5-7A0A0A0MS05 114 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MEX3AA1L020 520 aaKnown RBP18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TMEM212A6NML5 194 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR5K4A6NMS3 321 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 METTL12A8MUP2 240 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC17A2O00624 439 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PMP2P02689 132 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RFC3P40938 356 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PRPS1P60891 318 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC9A3R2Q15599 337 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RNASE10Q5GAN6 216 aaKnown RBP18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TANGO2Q6ICL3 276 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CNTNAP3BQ96NU0 1288 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SERINC4A6NH21 518 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MSGN1A6NI15 193 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ADAP1O75689 374 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SERPINF1P36955 418 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PAPD4Q6PIY7 484 aaKnown RBP18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 DNM1P46Q6ZS02 220 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 FAM122BQ7Z309 247 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MCHR2Q969V1 340 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MRI1Q9BV20 369 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KIR3DX1Q9H7L2 352 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MAFFQ9ULX9 164 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC17A4Q9Y2C5 497 aa18.46■□□□□ 0.55
MAP1LC3B-206ENST00000564844 A0A087WV62 115 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 LOC101059948A0A1B0GTJ6 334 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SLC16A7O60669 478 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 CD1AP06126 327 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ACAA1P09110 424 aaPredicted RBP18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ZNF735P0CB33 412 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ZNF10P21506 573 aaPredicted RBP18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SDHAP31040 664 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 HRH1P35367 487 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ELAVL1Q15717 326 aaKnown RBP18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SMAD2Q15796 467 aaKnown RBP18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ZNF74Q16587 644 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 TMEM225Q6GV28 225 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ZNF595Q8IYB9 648 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 GLYATL2Q8WU03 294 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FOXRED1Q96CU9 486 aaPredicted RBP18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 OR2M4Q96R27 311 aa18.46■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SERPINA5P05154 406 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 CD96P40200 585 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 EIF1AXP47813 144 aaKnown RBP18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FAM209BQ5JX69 171 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 TM4SF19Q96DZ7 209 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 CHMP1AQ9HD42 196 aaPredicted RBP18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FAM60AQ9NP50 221 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 HRASLS2Q9NWW9 162 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 GSKIPQ9P0R6 139 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FBXL21Q9UKT6 434 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ICOSLGO75144 302 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 APOC1P02654 83 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 EGR4Q05215 589 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ELOCQ15369 112 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 GFOD2Q3B7J2 385 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 CHRDL2Q6WN34 429 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 TRAPPC6BQ86SZ2 158 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FJX1Q86VR8 437 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 RPS4Y2Q8TD47 263 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 C20orf24Q9BUV8 137 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 EMC9Q9Y3B6 208 aa18.45■□□□□ 0.54
MAP1LC3B-206ENST00000564844 FBXO24O75426 580 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 DAOP14920 347 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 GNB3P16520 340 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 AVPI1Q5T686 147 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 LINC00346Q8IVM7 164 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 BCORP1Q8N888 145 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 OR1M1Q8NGA1 313 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 OR4K17Q8NGC6 315 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 C16orf52Q8NHV5 167 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 NT5CQ8TCD5 201 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 MARCH1Q8TCQ1 289 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ZC3H10Q96K80 434 aaKnown RBP18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SLC25A21Q9BQT8 299 aaPredicted RBP18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 SLC19A3Q9BZV2 496 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 NRSN2Q9GZP1 204 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 NIT2Q9NQR4 276 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 EPHA6Q9UF33 1036 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 KLF15Q9UIH9 416 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 C9orf170A2RU37 121 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 K7EQS6 105 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 CD8AP01732 235 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 S1PR1P21453 382 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 PPT1P50897 306 aa18.44■□□□□ 0.54
MAP1LC3B-206ENST00000564844 ZNF585AQ6P3V2 769 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms