RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	OPN4	Q9UHM6	478 aa		4.37	□□□□□ -1.71
TCF4-223	ENST00000564343	RCE1	Q9Y256	329 aa		4.37	□□□□□ -1.71
TCF4-223	ENST00000564343	CACNG2	Q9Y698	323 aa		4.37	□□□□□ -1.71
TCF4-223	ENST00000564343	FAM90A18P	A6NE21	464 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	FAM90A16P	A6NEW6	464 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343		A6NLC8	198 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	FAM90A9P	A6NNJ1	464 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	C17orf100	A8MU93	164 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	FAM90A5P	A8MXJ8	464 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	MS4A18	H0YCH9	400 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	TRAF3IP2	O43734	574 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF500	O60304	480 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	SPAG7	O75391	227 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	AHSA1	O95433	338 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	HPR	P00739	348 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	IGHV2-5	P01817	119 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	DBI	P07108	87 aa	Known RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	FAM90A15P	P0C7V4	464 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	FAM90A14P	P0C7W9	464 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	PATE4	P0C8F1	98 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	NR2F1	P10589	423 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	CCL2	P13500	99 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	B4GALT1	P15291	398 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	NCF2	P19878	526 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	CBL	P22681	906 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	IL12A	P29459	219 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	RBMX	P38159	391 aa	Known RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	MVD	P53602	400 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ERVS71-1	P61550	626 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	SUMO2	P61956	95 aa	Known RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	VAMP2	P63027	116 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	MRPS11	P82912	194 aa	Known RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	HOXC5	Q00444	222 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	GALK2	Q01415	458 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZP4	Q12836	540 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	MAD2L1	Q13257	205 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	GNA13	Q14344	377 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	MFSD13A	Q14CX5	517 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	SMU1	Q2TAY7	513 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	TRMT5	Q32P41	509 aa	Known RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	MS4A18	Q3C1V0	323 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	GLIPR1L2	Q4G1C9	344 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ANXA8L1	Q5VT79	327 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	DCAF12L2	Q5VW00	463 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	NHLRC1	Q6VVB1	395 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	IFT20	Q8IY31	132 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	CCDC36	Q8IYA8	594 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	PEX5L	Q8IYB4	626 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF440	Q8IYI8	595 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	BPIFB2	Q8N4F0	458 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF781	Q8N8C0	355 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	PCYOX1L	Q8NBM8	494 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	TCP10L	Q8TDR4	215 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	GTF3A	Q92664	365 aa	Known RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	TAAR8	Q969N4	342 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	APOPT1	Q96IL0	206 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	TXNDC15	Q96J42	360 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	CCDC115	Q96NT0	180 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	PANX1	Q96RD7	426 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	RHOXF2	Q9BQY4	288 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF416	Q9BWM5	594 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	C20orf27	Q9GZN8	174 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	OR51B6	Q9H340	312 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF385D	Q9H6B1	395 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	NTN4	Q9HB63	628 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	SLC52A3	Q9NQ40	469 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	SLC6A13	Q9NSD5	602 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	TAAR3P	Q9P1P4	343 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	WIPI2	Q9Y4P8	454 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	DSPP	Q9NZW4	1301 aa		4.36	□□□□□ -1.71
TCF4-223	ENST00000564343	IGKV1D-42	A0A075B6H8	117 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	IGLV3-9	A0A075B6K5	115 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343		A0A096LPI6	279 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	LOC102725191	A0A1B0GVB3	256 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343		A0A1W2PPW3	197 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343		E9PBE3	544 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343		J3QLI3	93 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	AP4M1	O00189	453 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	AIM2	O14862	343 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	BCHE	P06276	602 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	ALDOC	P09972	364 aa	Known RBP	4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	NUDT17	P0C025	328 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	ETFA	P13804	333 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	ZNF250	P15622	560 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	MDK	P21741	143 aa	Predicted RBP	4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	PRTN3	P24158	256 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	EPHA3	P29320	983 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	GRPR	P30550	384 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	S100A3	P33764	101 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	SERPINB5	P36952	375 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	CRYBB2	P43320	205 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	RAD52	P43351	418 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	NME5	P56597	212 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	COPZ1	P61923	177 aa		4.35	□□□□□ -1.71
TCF4-223	ENST00000564343	UFM1	P61960	85 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 66 ms