RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 EFCAB9A8MZ26 197 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 MRASO14807 208 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 SURF4O15260 269 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 TMPRSS2O15393 492 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 KCNAB3O43448 404 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 ICMTO60725 284 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 PRTN3P24158 256 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 RPL4P36578 427 aaKnown RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 YAP1P46937 504 aaKnown RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 SEC61A1P61619 476 aaKnown RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 BTG1P62324 171 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 SCRN3Q0VDG4 424 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 ZMYND11Q15326 602 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 TMEM155Q4W5P6 130 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 DOK3Q7L591 496 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 OAFQ86UD1 273 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 NRMQ8IXM6 262 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 SAMD8Q96LT4 415 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 SIKE1Q9BRV8 207 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 MS4A7Q9GZW8 240 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 POFUT1Q9H488 388 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 ZMAT3Q9HA38 289 aaKnown RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 PATZ1Q9HBE1 687 aaKnown RBP10.95□□□□□ -0.66
SF3B3-202ENST00000562722 POLE4Q9NR33 117 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 PLEK2Q9NYT0 353 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 RHCGQ9UBD6 479 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 KLHL21Q9UJP4 597 aa10.95□□□□□ -0.66
SF3B3-202ENST00000562722 HTR3EA5X5Y0 456 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 TRAPPC2LH3BP13 241 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 XKRYO14609 159 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 SGCEO43556 437 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 EDF1O60869 148 aaKnown RBP10.94□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF12P17014 697 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 SLC6A9P48067 706 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 PRR31Q5SQ13 230 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 METTL21CQ5VZV1 264 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 FOXL2NBQ6ZUU3 175 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 SYT9Q86SS6 491 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF283Q8N7M2 679 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 OR13C2Q8NGS9 318 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 C10orf82Q8WW14 230 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 ITLN1Q8WWA0 313 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 LZICQ8WZA0 190 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 SLC25A28Q96A46 364 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 CMBLQ96DG6 245 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 FNDC11Q9BVV2 318 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 RERGLQ9H628 205 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 TBCCD1Q9NVR7 557 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 GRHPRQ9UBQ7 328 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 A4GNTQ9UNA3 340 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 INSIG2Q9Y5U4 225 aa10.94□□□□□ -0.66
SF3B3-202ENST00000562722 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 BBIP1A8MTZ0 92 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 FAM220BPB1ANY3 271 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 HMGB1P1B2RPK0 211 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-202ENST00000562722 FXYD1O00168 92 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 SCG5P05408 212 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 COX5BP10606 129 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 KITLGP21583 273 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 TUBG1P23258 451 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 KDELR2P33947 212 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 MDH2P40926 338 aaKnown RBP10.93□□□□□ -0.66
SF3B3-202ENST00000562722 GUCY1A3Q02108 690 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 TRAM2Q15035 370 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 KLF17Q5JT82 389 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-202ENST00000562722 BTNL3Q6UXE8 466 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF730Q6ZMV8 503 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 Q6ZR03 302 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 LRRC28Q86X40 367 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-202ENST00000562722 OR5AS1Q8N127 324 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 MUC20Q8N307 709 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-202ENST00000562722 LRRC75AQ8NAA5 344 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 OR2T12Q8NG77 320 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 OR52E2Q8NGJ4 325 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 COG8Q96MW5 612 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF583Q96ND8 569 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 OR2V2Q96R30 315 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 NDEL1Q9GZM8 345 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF696Q9H7X3 374 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 UNKLQ9H9P5 680 aaKnown RBP10.93□□□□□ -0.66
SF3B3-202ENST00000562722 TUBG2Q9NRH3 451 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 IL19Q9UHD0 177 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 ADAM18Q9Y3Q7 739 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 WNK2Q9Y3S1 2297 aa10.93□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF682O95780 498 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 NPPAP01160 153 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 IFNW1P05000 195 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 RPS2P15880 293 aaKnown RBP10.92□□□□□ -0.66
SF3B3-202ENST00000562722 GPR4P46093 362 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 MTNR1AP48039 350 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 SLC9A3P48764 834 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 MMP16P51512 607 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 SELENOWP63302 87 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 SF3A3Q12874 501 aaKnown RBP eCLIP10.92□□□□□ -0.66
SF3B3-202ENST00000562722 AQP6Q13520 282 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 MAPRE2Q15555 327 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms