RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TNFSF10P50591 281 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 CDC20Q12834 499 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 RIN1Q13671 783 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 SLC25A35Q3KQZ1 300 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 ZNF766Q5HY98 468 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 PHYHD1Q5SRE7 291 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 GDPD1Q8N9F7 314 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 TMEM178AQ8NBL3 297 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 OR10AC1Q8NH08 325 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 NIPAL2Q9H841 368 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 EMC7Q9NPA0 242 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 B3GAT2Q9NPZ5 323 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 PAQR5Q9NXK6 330 aaPredicted RBP11.42□□□□□ -0.58
SNX1-211ENST00000560829 DAPK2Q9UIK4 370 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 FBXL3Q9UKT7 428 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 DMXL1Q9Y485 3027 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 IGKV3D-15A0A087WSY6 115 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 ZNF878C9JN71 531 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 MAGEB1P43366 347 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 PPIAP62937 165 aaKnown RBP11.42□□□□□ -0.58
SNX1-211ENST00000560829 CNIH2Q6PI25 160 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 FAM131AQ6UXB0 335 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 CFAP77Q6ZQR2 320 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 FCRLAQ7L513 359 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 SYT9Q86SS6 491 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 SLC22A16Q86VW1 577 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 LRRC28Q86X40 367 aaPredicted RBP11.42□□□□□ -0.58
SNX1-211ENST00000560829 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.42□□□□□ -0.58
SNX1-211ENST00000560829 RDH10Q8IZV5 341 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 FAM109AQ8N4B1 249 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 OR2AJ1Q8NGZ0 328 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 ROBO4Q8WZ75 1007 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 NABP1Q96AH0 204 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 TMEM45BQ96B21 275 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 GFI1Q99684 422 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 SLC6A15Q9H2J7 730 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 NELFAQ9H3P2 528 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 PPP1R3EQ9H7J1 279 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 FAM206AQ9NX38 181 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 SLC22A13Q9Y226 551 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 DOCK10Q96BY6 2186 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 TMEM269A0A1B0GVZ9 245 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 SLC43A1O75387 559 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ACTL6AO96019 429 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ATF1P18846 271 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 MSR1P21757 451 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 GUCA1AP43080 201 aaPredicted RBP11.41□□□□□ -0.58
SNX1-211ENST00000560829 STAC2Q6ZMT1 411 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ZNF704Q6ZNC4 412 aaPredicted RBP11.41□□□□□ -0.58
SNX1-211ENST00000560829 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.41□□□□□ -0.58
SNX1-211ENST00000560829 LRRTM1Q86UE6 522 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 MEIOBQ8N635 442 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 FDCSPQ8NFU4 85 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 OR51A4Q8NGJ6 313 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 TMEM106AQ96A25 262 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ORAI1Q96D31 301 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ZNF845Q96IR2 970 aaPredicted RBP11.41□□□□□ -0.58
SNX1-211ENST00000560829 COX4I2Q96KJ9 171 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ULBP2Q9BZM5 246 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 TCF7L1Q9HCS4 588 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 PNRC2Q9NPJ4 139 aaKnown RBP11.41□□□□□ -0.58
SNX1-211ENST00000560829 CYSLTR2Q9NS75 346 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 ASH2LQ9UBL3 628 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 OR52A1Q9UKL2 312 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 POLR1DQ9Y2S0 133 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 EMC9Q9Y3B6 208 aa11.41□□□□□ -0.58
SNX1-211ENST00000560829 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
SNX1-211ENST00000560829 IFITM5A6NNB3 132 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 ACOT7O00154 380 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 AIPO00170 330 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 CEACAM4O75871 244 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 SLC2A2P11168 524 aaPredicted RBP11.4□□□□□ -0.58
SNX1-211ENST00000560829 NPR2P20594 1047 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 ACHEP22303 614 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 NTF4P34130 210 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 SOX2P48431 317 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 CCL11P51671 97 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 HIST1H3AP68431 136 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 MRPS34P82930 218 aaKnown RBP11.4□□□□□ -0.58
SNX1-211ENST00000560829 SLC10A1Q14973 349 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 TRIM16LQ309B1 348 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 RIPPLY2Q5TAB7 128 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 HIST2H3PS2Q5TEC6 136 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 HIST2H3AQ71DI3 136 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 TRMT10AQ8TBZ6 339 aaKnown RBP11.4□□□□□ -0.58
SNX1-211ENST00000560829 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
SNX1-211ENST00000560829 PPP1R14AQ96A00 147 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 CMTM3Q96MX0 182 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 MRI1Q9BV20 369 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 ZNF416Q9BWM5 594 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 MOB1AQ9H8S9 216 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 ZDHHC11Q9H8X9 412 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 V9GY05 133 aa11.4□□□□□ -0.58
SNX1-211ENST00000560829 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.58
SNX1-211ENST00000560829 TTLL8A6PVC2 850 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 OCMP0CE72 109 aaPredicted RBP11.4□□□□□ -0.59
SNX1-211ENST00000560829 UBCP0CG48 685 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms