RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DOK2O60496 412 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 GASTP01350 101 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 TCN2P20062 427 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC6A12P48065 614 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 EXTL1Q92935 676 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 FER1L6-AS2Q96M78 137 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 HES4Q9HCC6 221 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 AMDHD2Q9Y303 409 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 EN2P19622 333 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 ADIPOQQ15848 244 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 APOOQ9BUR5 198 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 PTDSS2Q9BVG9 487 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM231Q9H6L2 316 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC22A20A6NK97 555 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 MGMTP16455 207 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 PSMB6P28072 239 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 DGAT2L7PQ6IED9 249 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CYS1Q717R9 158 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM116Q8NCL8 245 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CCDC187A0A096LP49 1063 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 A0A0A6YYC8 382 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 I3L1I5 382 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CCSO14618 274 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 RAF1P04049 648 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 ANKRD34CP0C6C1 535 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 TCTAP57738 103 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 ISCA2Q86U28 154 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 UMODL1-AS1Q8N2C9 162 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CLEC4DQ8WXI8 215 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 CMBLQ96DG6 245 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR2A14Q96R47 310 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 TP53RKQ96S44 253 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 PLA2G12AQ9BZM1 189 aa12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 AJAP1Q9UKB5 411 aaPredicted RBP12.74□□□□□ -0.37
CSPG4P12-202ENST00000559989 SALL3Q9BXA9 1300 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 FAM87AP0C7U9 286 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 ABCD3P28288 659 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 CCR7P32248 378 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 GAL3ST2Q9H3Q3 398 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 GPR173Q9NS66 373 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 NDUFB11Q9NX14 153 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 A0A0A6YYJ9 748 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 TRBV4-1A0A0J9YWV2 114 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 MS4A18H0YCH9 400 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 J3KTA2 159 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 GPR31O00270 319 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 AQP8O94778 261 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 MS4A18Q3C1V0 323 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC35E4Q6ICL7 350 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 DHRS4Q9BTZ2 278 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 SORBS1Q9BX66 1292 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 AIFM1O95831 613 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 DRD1P21728 446 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 HTR1DP28221 377 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 COL5A1-AS1Q5SY13 56 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 LRP11Q86VZ4 500 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 GSX2Q9BZM3 304 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF354AO60765 605 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 GYPAP02724 150 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF140P52738 457 aaPredicted RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 DOK3Q7L591 496 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM178AQ8NBL3 297 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 A0A1W2PNV4 684 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 WNT7AO00755 349 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 SOD1P00441 154 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 SNHG28P0DPA3 235 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 FPR3P25089 353 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 NOVA1P51513 510 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 TBPL2Q6SJ96 375 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF66Q6ZN08 573 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 WDR31Q8NA23 367 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 C11orf40Q8WZ69 217 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 PIGTQ969N2 578 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 A0A1B0GVG6 124 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 TCRBV3S1A0A5B6 114 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 IAPPP10997 89 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 DLX1P56177 255 aa12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 NXF2Q9GZY0 626 aaKnown RBP12.73□□□□□ -0.37
CSPG4P12-202ENST00000559989 IGLV3-22A0A075B6J6 115 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SYT5O00445 386 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 RPLP1P05386 114 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 CCL5P13501 91 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 P2RY2P41231 377 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF2Q9BSG1 426 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SEC11CQ9BY50 192 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 TRDV1A0A1B0GX56 115 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 NUDT3O95989 172 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 CD1EP15812 388 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms