RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 HIF3AQ9Y2N7 669 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 INSIG2Q9Y5U4 225 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 SVEP1Q4LDE5 3571 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 ARHGAP32A7KAX9 2087 aa7.74□□□□□ -1.17
HDDC3-204ENST00000559834 A0A1W2PPL8 197 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 TRAPPC2LH3BP13 241 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 CLDN34H7C241 214 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 KCNAB3O43448 404 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 SHOX2O60902 331 aaPredicted RBP7.73□□□□□ -1.17
HDDC3-204ENST00000559834 IFI30P13284 250 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 KITLGP21583 273 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 MDH2P40926 338 aaKnown RBP7.73□□□□□ -1.17
HDDC3-204ENST00000559834 OR1E2P47887 323 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 CRYBA2P53672 197 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 BTG1P62324 171 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 SCRN3Q0VDG4 424 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 TMEM255AQ5JRV8 349 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 SLC27A4Q6P1M0 643 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 BTNL3Q6UXE8 466 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 LRRN1Q6UXK5 716 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 FOXL2NBQ6ZUU3 175 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 OR8J3Q8NGG0 315 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 OR52E2Q8NGJ4 325 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 PTP4A1Q93096 173 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 HAVCR1Q96D42 359 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 CMBLQ96DG6 245 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 THOC1Q96FV9 657 aaKnown RBP7.73□□□□□ -1.17
HDDC3-204ENST00000559834 ATP6V1G3Q96LB4 118 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 DUX5Q96PT3 197 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 SIKE1Q9BRV8 207 aa7.73□□□□□ -1.17
HDDC3-204ENST00000559834 UNKLQ9H9P5 680 aaKnown RBP7.73□□□□□ -1.17
HDDC3-204ENST00000559834 INTS9Q9NV88 658 aaKnown RBP7.73□□□□□ -1.17
HDDC3-204ENST00000559834 DNAJC9-AS1A6NH13 148 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 A8MXK9 166 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 XKRYO14609 159 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 AHCYL1O43865 530 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 RNASE1P07998 156 aaKnown RBP7.72□□□□□ -1.17
HDDC3-204ENST00000559834 PPIAL4GP0DN37 164 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 TNFRSF1BP20333 461 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 KDELR2P33947 212 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 SELENOWP63302 87 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 PAX8Q06710 450 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 ENDOGQ14249 297 aaKnown RBP7.72□□□□□ -1.17
HDDC3-204ENST00000559834 SPRNQ5BIV9 151 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 RABL3Q5HYI8 236 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 TREML4Q6UXN2 200 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 OAFQ86UD1 273 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 CALHM3Q86XJ0 350 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 RNF113BQ8IZP6 322 aaKnown RBP7.72□□□□□ -1.17
HDDC3-204ENST00000559834 BCL6BQ8N143 479 aaPredicted RBP7.72□□□□□ -1.17
HDDC3-204ENST00000559834 ATG16L2Q8NAA4 619 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 OR5L1Q8NGL2 311 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 OR51A7Q8NH64 312 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 LZICQ8WZA0 190 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 TPD52L3Q96J77 140 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 PLEKHA8Q96JA3 519 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 FNDC11Q9BVV2 318 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 NDEL1Q9GZM8 345 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 SLITRK2Q9H156 845 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 POLE4Q9NR33 117 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 GRHPRQ9UBQ7 328 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 LRCH1Q9Y2L9 728 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 STARD10Q9Y365 291 aa7.72□□□□□ -1.17
HDDC3-204ENST00000559834 A0A0G2JND7 137 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 EFCAB9A8MZ26 197 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 TMEM178BH3BS89 294 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 J3QW42 95 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 FBP2O00757 339 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 SGCEO43556 437 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 DOK2O60496 412 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 WNT2P09544 360 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 RAC2P15153 192 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 CD80P33681 288 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 RPL4P36578 427 aaKnown RBP7.71□□□□□ -1.18
HDDC3-204ENST00000559834 HTR5AP47898 357 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 SLC9A3P48764 834 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 SRP9P49458 86 aaKnown RBP7.71□□□□□ -1.18
HDDC3-204ENST00000559834 RGS6P49758 472 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 GNB2P62879 340 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 GUCY1A3Q02108 690 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 PRKCDQ05655 676 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 TRAM2Q15035 370 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 ZMYND11Q15326 602 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 CYBRD1Q53TN4 286 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 COQ5Q5HYK3 327 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 KLF17Q5JT82 389 aaPredicted RBP7.71□□□□□ -1.18
HDDC3-204ENST00000559834 C16orf87Q6PH81 154 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 Q6ZR03 302 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 RRM2BQ7LG56 351 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 IGFN1Q86VF2 1251 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 CLDN22Q8N7P3 220 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 PCYOX1LQ8NBM8 494 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 OR13G1Q8NGZ3 307 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 C10orf82Q8WW14 230 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 ITLN1Q8WWA0 313 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 PRRC1Q96M27 445 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF583Q96ND8 569 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 OR2V2Q96R30 315 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms