RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TNFRSF1AP19438 455 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 GSTM3P21266 225 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 KITLGP21583 273 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 TUBG1P23258 451 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 TNFSF4P23510 183 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 GUCA1AP43080 201 aaPredicted RBP11.03□□□□□ -0.64
TPM1-220ENST00000559556 CTXN1P60606 82 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 RAP1BP61224 184 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 SEC61A1P61619 476 aaKnown RBP11.03□□□□□ -0.64
TPM1-220ENST00000559556 RAP1AP62834 184 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 ST3GAL3Q11203 375 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 ZNF154Q13106 437 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 HNRNPA0Q13151 305 aaKnown RBP11.03□□□□□ -0.64
TPM1-220ENST00000559556 FHL1Q13642 323 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 ANKDD1AQ495B1 522 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 COQ5Q5HYK3 327 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 METTL21CQ5VZV1 264 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 SHISA2Q6UWI4 295 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 RBMS3Q6XE24 437 aaKnown RBP11.03□□□□□ -0.64
TPM1-220ENST00000559556 LRRC75AQ8NAA5 344 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 SAMD8Q96LT4 415 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 PRRC1Q96M27 445 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 GPA33Q99795 319 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 ECSITQ9BQ95 431 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 SIKE1Q9BRV8 207 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 WACQ9BTA9 647 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 POFUT1Q9H488 388 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 POLE4Q9NR33 117 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 TUBG2Q9NRH3 451 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 INTS9Q9NV88 658 aaKnown RBP11.03□□□□□ -0.64
TPM1-220ENST00000559556 TBCCD1Q9NVR7 557 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 ZNF69Q9UC07 566 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 IL19Q9UHD0 177 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 EGFL7Q9UHF1 273 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 A4GNTQ9UNA3 340 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 INSIG2Q9Y5U4 225 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 AUP1Q9Y679 476 aa11.03□□□□□ -0.64
TPM1-220ENST00000559556 EDF1O60869 148 aaKnown RBP11.02□□□□□ -0.65
TPM1-220ENST00000559556 NPPAP01160 153 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 SBK2P0C263 348 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 IFI30P13284 250 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 SLC6A9P48067 706 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 BTG1P62324 171 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 ZMYND11Q15326 602 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 CYBRD1Q53TN4 286 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 Q6ZR03 302 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 IGFN1Q86VF2 1251 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 LRRC28Q86X40 367 aaPredicted RBP11.02□□□□□ -0.65
TPM1-220ENST00000559556 OFCC1Q8IZS5 231 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 FAM156AQ8NDB6 213 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 ZNF583Q96ND8 569 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 MAN2C1Q9NTJ4 1040 aa11.02□□□□□ -0.65
TPM1-220ENST00000559556 TRAV27A0A087WT01 109 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 A0A0G2JND7 137 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 SGCEO43556 437 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 DOK2O60496 412 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 SCG5P05408 212 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 RNASE1P07998 156 aaKnown RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 RBMXP38159 391 aaKnown RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 MDH2P40926 338 aaKnown RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 HTR5AP47898 357 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 SLC9A3P48764 834 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 SCRN3Q0VDG4 424 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 LRRC23Q53EV4 343 aaPredicted RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 BCL6BQ8N143 479 aaPredicted RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 OR2Z1Q8NG97 314 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 C10orf82Q8WW14 230 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 ITLN1Q8WWA0 313 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 DUX5Q96PT3 197 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 DCLRE1CQ96SD1 692 aaKnown RBP11.01□□□□□ -0.65
TPM1-220ENST00000559556 MRI1Q9BV20 369 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 EMC7Q9NPA0 242 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 PPP1R3CQ9UQK1 317 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 LRCH1Q9Y2L9 728 aa11.01□□□□□ -0.65
TPM1-220ENST00000559556 PLXNB1O43157 2135 aa11□□□□□ -0.65
TPM1-220ENST00000559556 BBIP1A8MTZ0 92 aa11□□□□□ -0.65
TPM1-220ENST00000559556 FAM220BPB1ANY3 271 aa11□□□□□ -0.65
TPM1-220ENST00000559556 H7C1C5 153 aa11□□□□□ -0.65
TPM1-220ENST00000559556 CLDN34H7C241 214 aa11□□□□□ -0.65
TPM1-220ENST00000559556 MRASO14807 208 aa11□□□□□ -0.65
TPM1-220ENST00000559556 SURF4O15260 269 aa11□□□□□ -0.65
TPM1-220ENST00000559556 PPIAL4GP0DN37 164 aa11□□□□□ -0.65
TPM1-220ENST00000559556 FUT4P22083 530 aa11□□□□□ -0.65
TPM1-220ENST00000559556 KDELR2P33947 212 aa11□□□□□ -0.65
TPM1-220ENST00000559556 LCN6P62502 163 aa11□□□□□ -0.65
TPM1-220ENST00000559556 SELENOWP63302 87 aa11□□□□□ -0.65
TPM1-220ENST00000559556 PAX2Q02962 417 aa11□□□□□ -0.65
TPM1-220ENST00000559556 PRKCDQ05655 676 aa11□□□□□ -0.65
TPM1-220ENST00000559556 ESCO2Q56NI9 601 aa11□□□□□ -0.65
TPM1-220ENST00000559556 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
TPM1-220ENST00000559556 OAFQ86UD1 273 aa11□□□□□ -0.65
TPM1-220ENST00000559556 NRMQ8IXM6 262 aa11□□□□□ -0.65
TPM1-220ENST00000559556 MICU2Q8IYU8 434 aa11□□□□□ -0.65
TPM1-220ENST00000559556 MUC20Q8N307 709 aaPredicted RBP11□□□□□ -0.65
TPM1-220ENST00000559556 OR13C2Q8NGS9 318 aa11□□□□□ -0.65
TPM1-220ENST00000559556 OR51A7Q8NH64 312 aa11□□□□□ -0.65
TPM1-220ENST00000559556 SLC25A28Q96A46 364 aa11□□□□□ -0.65
TPM1-220ENST00000559556 TPD52L3Q96J77 140 aa11□□□□□ -0.65
TPM1-220ENST00000559556 COG8Q96MW5 612 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms