RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LYVE1Q9Y5Y7 322 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CDH10Q9Y6N8 788 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ACANP16112 2415 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 MED13LQ71F56 2210 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 HIVEP2P31629 2446 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FLNAP21333 2647 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 CSPG4Q6UVK1 2322 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 IGLV3-9A0A075B6K5 115 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 IGHV4-30-2A0A087WSY4 118 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 TCRBV5S2A0A599 114 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ARRDC5A6NEK1 342 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 OR6C6A6NF89 314 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 RIIAD1A6NNX1 92 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 C17orf100A8MU93 164 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 H3BSA7 217 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 J3QW42 95 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ACOT8O14734 319 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 DOK2O60496 412 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 DEAF1O75398 565 aaPredicted RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 LY6G6DO95868 133 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 DAOP14920 347 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF250P15622 560 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 HIST1H1CP16403 213 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF823P16415 610 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF26P17031 533 aaPredicted RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF3P17036 446 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 PAICSP22234 425 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 USF1P22415 310 aaPredicted RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 CDKN2AP42771 156 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 ALDH3B1P43353 468 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 HTR5AP47898 357 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 RGS6P49758 472 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 BLVRAP53004 296 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FXYD6P3P58550 94 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 MRPS11P82912 194 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 TEKQ02763 1124 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 BNIP1Q12981 228 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 GGTLC2Q14390 218 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 PCGF3Q3KNV8 242 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FAM209AQ5JX71 171 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 SLC35F1Q5T1Q4 408 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 C1orf146Q5VVC0 180 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 MBNL2Q5VZF2 373 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF774Q6NX45 483 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 UGT2A3Q6UWM9 527 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 DNM1P46Q6ZS02 220 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 RASSF6Q6ZTQ3 369 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FOXL2NBQ6ZUU3 175 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 PTCHD4Q6ZW05 846 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 Q71RC1 249 aaPredicted RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 OR6V1Q8N148 313 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF786Q8N393 782 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 LNX2Q8N448 690 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZNF511Q8NB15 262 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 NPEPL1Q8NDH3 523 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 PROKR2Q8NFJ6 384 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 OR10G2Q8NGC3 310 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 OR9Q2Q8NGE9 314 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 OR52E2Q8NGJ4 325 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 OR4C15Q8NGM1 316 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 AKR7LQ8NHP1 331 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FGFBP3Q8TAT2 258 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 C10orf105Q8TEF2 133 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 UBASH3BQ8TF42 649 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 GIPC3Q8TF64 312 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 POM121L2Q96KW2 1035 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FOXN4Q96NZ1 517 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 SNX18Q96RF0 628 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 DIRC2Q96SL1 478 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FEVQ99581 238 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 PITX2Q99697 317 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 GPA33Q99795 319 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 SMR3AQ99954 134 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 TSSK6Q9BXA6 273 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 DGCR6LQ9BY27 220 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 MRPL37Q9BZE1 423 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 RACGAP1Q9H0H5 632 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 HDHD2Q9H0R4 259 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 WNT5BQ9H1J7 359 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 TPK1Q9H3S4 243 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 GSX1Q9H4S2 264 aaPredicted RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 EGLN3Q9H6Z9 239 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 CHODLQ9H9P2 273 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 SAP30LQ9HAJ7 183 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 EMC7Q9NPA0 242 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 HINT3Q9NQE9 182 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 RPRD1BQ9NQG5 326 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 TBCCD1Q9NVR7 557 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 TAAR3PQ9P1P4 343 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 KIF17Q9P2E2 1029 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ATPIF1Q9UII2 106 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 KCNG2Q9UJ96 466 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 FZR1Q9UM11 496 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 B9D1Q9UPM9 204 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 POMPQ9Y244 141 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 GRIP1Q9Y3R0 1128 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 C2CD3Q4AC94 2353 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 HEATR1Q9H583 2144 aaKnown RBP3.76□□□□□ -1.81
SNX1-205ENST00000559339 VPS13CQ709C8 3753 aa3.76□□□□□ -1.81
SNX1-205ENST00000559339 ZFHX3Q15911 3703 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms