RNA–Protein interactions for RNA: ENST00000558518.5

LDLR-208, Transcript of low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDLR, Length 3,617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-208ENST00000558518 ARRB1P49407 418 aaPredicted RBP10.24□□□□□ -0.77
LDLR-208ENST00000558518 FBXW4P57775 412 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 B2MP61769 119 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 ZP2Q05996 745 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
LDLR-208ENST00000558518 ZNF616Q08AN1 781 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 ADAM5Q6NVV9 412 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 TTLL10Q6ZVT0 673 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 FJX1Q86VR8 437 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 CD300LFQ8TDQ1 290 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 OR2A5Q96R48 311 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 PITHD1Q9GZP4 211 aaPredicted RBP10.24□□□□□ -0.77
LDLR-208ENST00000558518 CFAP54Q96N23 3096 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 TACR3P29371 465 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 PMPCAQ10713 525 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 LINC01590Q5TEZ4 76 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 ARMC6Q6NXE6 501 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 UNQ9370/PRO34162Q6UXP9 181 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 CLEC1AQ8NC01 280 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 GPR119Q8TDV5 335 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 THAP3Q8WTV1 239 aaPredicted RBP10.24□□□□□ -0.77
LDLR-208ENST00000558518 C15orf40Q8WUR7 153 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 DGAT2Q96PD7 388 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 SFXN1Q9H9B4 322 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 NDRG3Q9UGV2 375 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 MRPS33Q9Y291 106 aaKnown RBP10.24□□□□□ -0.77
LDLR-208ENST00000558518 POLR1DQ9Y2S0 133 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 ETV7Q9Y603 341 aa10.24□□□□□ -0.77
LDLR-208ENST00000558518 MRPS18BQ9Y676 258 aaKnown RBP10.24□□□□□ -0.77
LDLR-208ENST00000558518 PHF3Q92576 2039 aaKnown RBP10.23□□□□□ -0.77
LDLR-208ENST00000558518 MPTX1A8MV57 137 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 NDUFA2O43678 99 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 EFEMP2O95967 443 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 CXCR1P25024 350 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 ADH6P28332 368 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 GDI1P31150 447 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 KIR3DL2P43630 455 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 IL10RAQ13651 578 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 CD226Q15762 336 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 ZNF425Q6IV72 752 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 TAF8Q7Z7C8 310 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 EID2Q8N6I1 236 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 MRPL43Q8N983 215 aaKnown RBP10.23□□□□□ -0.77
LDLR-208ENST00000558518 AVL9Q8NBF6 648 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 MMABQ96EY8 250 aaPredicted RBP10.23□□□□□ -0.77
LDLR-208ENST00000558518 AKR1E2Q96JD6 320 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 ST6GALNAC5Q9BVH7 336 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 BANF2Q9H503 90 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 ZNF304Q9HCX3 659 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 RNF222A6NCQ9 220 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 ZNF205O95201 554 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 RCC1P18754 421 aaPredicted RBP10.23□□□□□ -0.77
LDLR-208ENST00000558518 SDHAP31040 664 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 CD96P40200 585 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 MED25Q71SY5 747 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 NAA40Q86UY6 237 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 OR5M8Q8NGP6 311 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 GPER1Q99527 375 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 SEMA6CQ9H3T2 930 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 KLK13Q9UKR3 277 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 PLXNA2O75051 1894 aa10.23□□□□□ -0.77
LDLR-208ENST00000558518 SERINC4A6NH21 518 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 LILRB3O75022 631 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 TPT1P13693 172 aaKnown RBP10.22□□□□□ -0.77
LDLR-208ENST00000558518 RBM34P42696 430 aaKnown RBP10.22□□□□□ -0.77
LDLR-208ENST00000558518 PRPS1P60891 318 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 DHODHQ02127 395 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 FHL1Q13642 323 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 FAM122BQ7Z309 247 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 KCNRGQ8N5I3 272 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 OR5T2Q8NGG2 359 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 OR13C9Q8NGT0 318 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 OR11A1Q9GZK7 315 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 DZANK1Q9NVP4 752 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 SERTAD3Q9UJW9 196 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 TNFSF18Q9UNG2 199 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 OR6C65A6NJZ3 312 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 TMEM212A6NML5 194 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 SNAPINO95295 136 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 FABP1P07148 127 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 MYOGP15173 224 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 NQO2P16083 231 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 S1PR1P21453 382 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 TOMM34Q15785 309 aaPredicted RBP10.22□□□□□ -0.77
LDLR-208ENST00000558518 MESTQ5EB52 335 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 OR1M1Q8NGA1 313 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 C16orf52Q8NHV5 167 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 FGGYQ96C11 551 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 SOHLH2Q9NX45 425 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 LRP3O75074 770 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 ICOSLGO75144 302 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 MPIG6BO95866 241 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 FOXL2P58012 376 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 RAB5BP61020 215 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 ELOCQ15369 112 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 INPP5JQ15735 1006 aaPredicted RBP10.22□□□□□ -0.77
LDLR-208ENST00000558518 PDZD11Q5EBL8 140 aa10.22□□□□□ -0.77
LDLR-208ENST00000558518 CDCP2Q5VXM1 449 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms