RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TOLLIPQ9H0E2 274 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 RNF150Q9ULK6 438 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 KIR2DS5A0A0G2JLQ3 304 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 A0A0G2JNG1 304 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 KIR2DS3K7RE56 304 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 ALOX5APP20292 161 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 ZNF92Q03936 586 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 KIR2DS5Q14953 304 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 S100A7AQ86SG5 101 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 APH1BQ8WW43 257 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
SPG11-210ENST00000558319 OBP2AQ9NY56 170 aa12.8□□□□□ -0.36
SPG11-210ENST00000558319 TRDV1A0A1B0GX56 115 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 A0A1W2PPQ1 181 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 NKX2-1P43699 371 aaPredicted RBP12.79□□□□□ -0.36
SPG11-210ENST00000558319 FAM219BQ5XKK7 198 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 OPN5Q6U736 354 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 LFNGQ8NES3 379 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 CHST8Q9H2A9 424 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 ZDHHC11Q9H8X9 412 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 GPR160Q9UJ42 338 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 SLC16A6O15403 523 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 IAPPP10997 89 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 RNF212Q495C1 297 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 HTR3DQ70Z44 454 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 OR1N1Q8NGS0 311 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 WFDC5Q8TCV5 224 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 GPR119Q8TDV5 335 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 CTDSP1Q9GZU7 261 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 RAB22AQ9UL26 194 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 TMEM200CA6NKL6 621 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 S100A8P05109 93 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 SCGB1C2P0DMR2 95 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 DUSP1P28562 367 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 BTG1P62324 171 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
SPG11-210ENST00000558319 TEX37Q96LM6 180 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 SARGQ9BW04 601 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 C6orf106Q9H6K1 298 aaPredicted RBP12.79□□□□□ -0.36
SPG11-210ENST00000558319 GDE1Q9NZC3 331 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
SPG11-210ENST00000558319 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
SPG11-210ENST00000558319 A0A1B0GTW7 788 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 AOAHP28039 575 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 LPCAT3Q6P1A2 487 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 Q7L0L9 218 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 OR5M9Q8NGP3 310 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 CMBLQ96DG6 245 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 TAS2R4Q9NYW5 299 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 MN1Q10571 1320 aaPredicted RBP12.79□□□□□ -0.36
SPG11-210ENST00000558319 PMCHP20382 165 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 H3F3AP84243 136 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 SHHQ15465 462 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 VWA2Q5GFL6 755 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 SLC25A32Q9H2D1 315 aa12.79□□□□□ -0.36
SPG11-210ENST00000558319 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SERTM1A2A2V5 107 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SDCBPO00560 298 aaPredicted RBP12.78□□□□□ -0.36
SPG11-210ENST00000558319 RRASP10301 218 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 BAMBIQ13145 260 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 CD300LGQ6UXG3 332 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 GDF7Q7Z4P5 450 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ZNF561Q8N587 486 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ACOT8O14734 319 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 GPR75O95800 540 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 PRLHRP49683 370 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SRPXP78539 464 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 OXA1LQ15070 435 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ZNF534Q76KX8 674 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 H2BFWTQ7Z2G1 175 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ZNF680Q8NEM1 530 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 OR10D4PQ8NGN7 298 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 OR13C5Q8NGS8 318 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 VAMP8Q9BV40 100 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 HES7Q9BYE0 225 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ENTPD2Q9Y5L3 495 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SIRPB1O00241 398 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 GABRB1P18505 474 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SDHBP21912 280 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 PCBD1P61457 104 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 RBM45Q8IUH3 476 aaKnown RBP12.78□□□□□ -0.36
SPG11-210ENST00000558319 FAM71CQ8NEG0 241 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 MBOAT4Q96T53 435 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SOX7Q9BT81 388 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ACOXLQ9NUZ1 547 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 GDF2Q9UK05 429 aaPredicted RBP12.78□□□□□ -0.36
SPG11-210ENST00000558319 CSF3P09919 207 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 MZT1Q08AG7 82 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ARRDC1-AS1Q9H2J1 176 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 CXorf36Q9H7Y0 433 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 SRPK3Q9UPE1 567 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 TRGV8A0A0C4DH27 118 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms