RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CPOQ8IVL8 374 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 ZNF511Q8NB15 262 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 BBS1Q8NFJ9 593 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 PTP4A1Q93096 173 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 EME1Q96AY2 570 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 GRIP2Q9C0E4 1043 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 CA10Q9NS85 328 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 PLEK2Q9NYT0 353 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 USE1Q9NZ43 259 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 EDARQ9UNE0 448 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 ORC6Q9Y5N6 252 aa12.4□□□□□ -0.42
USP3-205ENST00000557884 MAP1AP78559 2803 aaPredicted RBP12.4□□□□□ -0.42
USP3-205ENST00000557884 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 SGCEO43556 437 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 PRKYO43930 277 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 GPRIN2O60269 458 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 DANCRP0C864 163 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 FAM157BP0CG42 384 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 ANPEPP15144 967 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 ZNF823P16415 610 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 NR4A1P22736 598 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 FMO3P31513 532 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 THBS4P35443 961 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 HTR5AP47898 357 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 ADAM8P78325 824 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 ELF3P78545 371 aaPredicted RBP12.39□□□□□ -0.43
USP3-205ENST00000557884 CCDC92Q53HC0 331 aaPredicted RBP12.39□□□□□ -0.43
USP3-205ENST00000557884 TMEM154Q6P9G4 183 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 ZBTB49Q6ZSB9 765 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 VASH1Q7L8A9 365 aaPredicted RBP12.39□□□□□ -0.43
USP3-205ENST00000557884 CXXC5Q7LFL8 322 aaKnown RBP12.39□□□□□ -0.43
USP3-205ENST00000557884 ALDH16A1Q8IZ83 802 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 FBXL14Q8N1E6 418 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 SLC7A6Q92536 515 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 ZMYND19Q96E35 227 aaPredicted RBP12.39□□□□□ -0.43
USP3-205ENST00000557884 SLC29A1Q99808 456 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 CDADC1Q9BWV3 514 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 C1orf198Q9H425 327 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 WDR76Q9H967 626 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 COMMD3-BMI1R4GMX3 469 aa12.39□□□□□ -0.43
USP3-205ENST00000557884 CD8AP01732 235 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 SPARCP09486 303 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 OR4A8P0C604 315 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 PSKH1P11801 424 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 GSTT1P30711 240 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 TTKP33981 857 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 GGT2P36268 569 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 RPS7P62081 194 aaKnown RBP12.38□□□□□ -0.43
USP3-205ENST00000557884 NKX6-1P78426 367 aaPredicted RBP12.38□□□□□ -0.43
USP3-205ENST00000557884 TRIP10Q15642 601 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 ADIPOQQ15848 244 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 LINC01590Q5TEZ4 76 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 SLC18B1Q6NT16 456 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 ZNF544Q6NX49 715 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 CFAP77Q6ZQR2 320 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 BCDIN3DQ7Z5W3 292 aaKnown RBP12.38□□□□□ -0.43
USP3-205ENST00000557884 MUC15Q8N387 334 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 GJC3Q8NFK1 279 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 OR2AJ1Q8NGZ0 328 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 TMEM171Q8WVE6 324 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 NINJ1Q92982 152 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 POM121L2Q96KW2 1035 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 IL4I1Q96RQ9 567 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 WACQ9BTA9 647 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 PRRG3Q9BZD7 231 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 CYB5R1Q9UHQ9 305 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 GDF2Q9UK05 429 aaPredicted RBP12.38□□□□□ -0.43
USP3-205ENST00000557884 FZR1Q9UM11 496 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 SPEF1Q9Y4P9 236 aa12.38□□□□□ -0.43
USP3-205ENST00000557884 ZNF593O00488 134 aaPredicted RBP12.37□□□□□ -0.43
USP3-205ENST00000557884 SYNGR3O43761 229 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 TLX2O43763 284 aaPredicted RBP12.37□□□□□ -0.43
USP3-205ENST00000557884 GLCEO94923 617 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 DBHP09172 617 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 APOBEC3AP31941 199 aaPredicted RBP12.37□□□□□ -0.43
USP3-205ENST00000557884 CDKN1AP38936 164 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 WNT5AP41221 380 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 ENTPD1P49961 510 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 RAD23AP54725 363 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 APOFQ13790 326 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 RAB35Q15286 201 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 MSMPQ1L6U9 139 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 LRRC36Q1X8D7 754 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 DEFB113Q30KQ7 82 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 ERI1Q8IV48 349 aaKnown RBP12.37□□□□□ -0.43
USP3-205ENST00000557884 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 PIGTQ969N2 578 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 MBOAT4Q96T53 435 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 PITX2Q99697 317 aa12.37□□□□□ -0.43
USP3-205ENST00000557884 TRAF4Q9BUZ4 470 aaPredicted RBP12.37□□□□□ -0.43
USP3-205ENST00000557884 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms