RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 OR13C2Q8NGS9 318 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 OR10J5Q8NHC4 309 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 STOML3Q8TAV4 291 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FNDC9Q8TBE3 224 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FAM45AQ8TCE6 357 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 ZFAND1Q8TCF1 268 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 ACTRT1Q8TDG2 376 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CD300LFQ8TDQ1 290 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 LIPHQ8WWY8 451 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CORO2AQ92828 525 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PHF21BQ96EK2 531 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 OR5M11Q96RB7 305 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CITED2Q99967 270 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 SORBS1Q9BX66 1292 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 NXF5Q9H1B4 397 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TOR3AQ9H497 397 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 KAT8Q9H7Z6 458 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 WDR41Q9HAD4 459 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FOLH1BQ9HBA9 442 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 MID1IP1Q9NPA3 183 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 MCUBQ9NWR8 336 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 LYARQ9NX58 379 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 CISD1Q9NZ45 108 aaKnown RBP4.29□□□□□ -1.72
ATXN3-247ENST00000557311 TREM2Q9NZC2 230 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 DKKL1Q9UK85 242 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 FBXL2Q9UKC9 423 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 NUBP2Q9Y5Y2 271 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 AP4B1Q9Y6B7 739 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 HSPE1-MOB4S4R3N1 261 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 ZANQ9Y493 2812 aa4.29□□□□□ -1.72
ATXN3-247ENST00000557311 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 A0A0A6YYH2 397 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PGPEP1LA6NFU8 196 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 SERINC4A6NH21 518 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 A6NJ64 397 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GLOD5A6NK44 160 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 H3BMQ9 156 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 ADAMDEC1O15204 470 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 SLC16A6O15403 523 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PRKYO43930 277 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 REM1O75628 298 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 BCAS2O75934 225 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 AQP8O94778 261 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 ANGPTL1O95841 491 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PNPP00491 289 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 IFNA6P05013 189 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 NUDT17P0C025 328 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 CT62P0C5K7 136 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 ZNF37AP17032 561 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 SPI1P17947 270 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 CD22P20273 847 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 MALP21145 153 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PTNP21246 168 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 S1PR1P21453 382 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GPX3P22352 226 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GIFP27352 417 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 BDKRB2P30411 391 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 ALDH3B1P43353 468 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 MAGEB1P43366 347 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PPICP45877 212 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 RBP2P50120 134 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 RAD23AP54725 363 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 UGT2B15P54855 530 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 TMBIM6P55061 237 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 CTBP2P56545 445 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PRPS1P60891 318 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PIGFQ07326 219 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 MERTKQ12866 999 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 LASP1Q14847 261 aaKnown RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 RAB35Q15286 201 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 TSNQ15631 228 aaKnown RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GPR68Q15743 365 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 CTU2Q2VPK5 515 aaKnown RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 RFX4Q33E94 735 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GLYR1Q49A26 553 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PDLIM3Q53GG5 364 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 SPANXN3Q5MJ09 141 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 TEDDM1Q5T9Z0 273 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 ATPAF1Q5TC12 328 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 OR5M10Q6IEU7 315 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 METAP1DQ6UB28 335 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 NPSR1Q6W5P4 371 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 Q6ZPA2 131 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GPSM1Q86YR5 675 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 SYT14Q8NB59 555 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 RBM15BQ8NDT2 890 aaKnown RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 OR4K17Q8NGC6 315 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 OR4K14Q8NGD5 310 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 OR6F1Q8NGZ6 308 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 NSMAFQ92636 917 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 NEUROG1Q92886 237 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 SH3YL1Q96HL8 342 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 GMPPAQ96IJ6 420 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-247ENST00000557311 BOD1Q96IK1 185 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 COL21A1Q96P44 957 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 NAT9Q9BTE0 207 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 POTEKPQ9BYX7 375 aa4.28□□□□□ -1.72
ATXN3-247ENST00000557311 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms