RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 APOA1P02647 267 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 CNR1P21554 472 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 SCN1BQ07699 218 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 STAC2Q6ZMT1 411 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 LRRC28Q86X40 367 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 HAVCR2Q8TDQ0 301 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 PHYHIPQ92561 330 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 POLR1DQ9Y2S0 133 aa16.27■□□□□ 0.2
SDR39U1-220ENST00000556548 NPIPA2E9PIF3 369 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 NPIPA3F8WFD2 350 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 AQP8O94778 261 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 TPPPO94811 219 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 H2BFMP0C1H6 154 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 ADRA2CP18825 462 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 TALDO1P37837 337 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 CSNK2A1P68400 391 aaPredicted RBP16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 PCK2Q16822 640 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 CREB3L2Q70SY1 520 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 CELF2-AS1Q8N7Q2 184 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 LGALS14Q8TCE9 139 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 UTP23Q9BRU9 249 aaKnown RBP16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 OR2B2Q9GZK3 357 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 ZFP64Q9NPA5 681 aa16.27■□□□□ 0.19
SDR39U1-220ENST00000556548 ZFHX2Q9C0A1 2572 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 GPR171O14626 319 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 EIF1BO60739 113 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 MAPK3P27361 379 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 SUCLG1P53597 346 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 FOXO1Q12778 655 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 OR1C1Q15619 314 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 ZNF239Q16600 458 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 PHYHD1Q5SRE7 291 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 JMJD6Q6NYC1 403 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 IL17RDQ8NFM7 739 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 OR9K2Q8NGE7 335 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 ADAMTS14Q8WXS8 1223 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 KIAA1143Q96AT1 154 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 SLAMF6Q96DU3 332 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 NKX3-1Q99801 234 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 NAA11Q9BSU3 229 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 ZCCHC4Q9H5U6 513 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 CYB5R1Q9UHQ9 305 aa16.26■□□□□ 0.19
SDR39U1-220ENST00000556548 HSPB2A8KAH6 182 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 HRGP04196 525 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 NPR2P20594 1047 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 CASRP41180 1078 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 RFX2P48378 723 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 GNG2P59768 71 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 SRSF6Q13247 344 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 HSPB2Q16082 182 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 TRIQKQ629K1 86 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 FDX2Q6P4F2 183 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 SLC25A47Q6Q0C1 308 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 METAP1DQ6UB28 335 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 CFAP77Q6ZQR2 320 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 VASH2Q86V25 355 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 CATSPERDQ86XM0 798 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 CLEC1AQ8NC01 280 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 OR6N1Q8NGY5 312 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 SLITRK2Q9H156 845 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 MRPS7Q9Y2R9 242 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 V9GY05 133 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 MED13Q9UHV7 2174 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 ZNF292O60281 2723 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 TMEM269A0A1B0GVZ9 245 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 IFITM5A6NNB3 132 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 PDCD5O14737 125 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 ICMTO60725 284 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 PRKACBP22694 351 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 SELENOPP49908 381 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 CARD18P57730 90 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 AIMP2Q13155 320 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 RNASE12Q5GAN4 147 aaKnown RBP16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 GGNQ86UU5 652 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 ROBO4Q8WZ75 1007 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 C11orf54Q9H0W9 315 aaPredicted RBP16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 LHFPL6Q9Y693 200 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 R4GMQ9 66 aa16.25■□□□□ 0.19
SDR39U1-220ENST00000556548 LOC102725191A0A1B0GVB3 256 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 GJE1A6NN92 205 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 SMAD9O15198 467 aaKnown RBP16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 CXCL13O43927 109 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 CELA3AP09093 270 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 RBMS1P29558 406 aaKnown RBP16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 CCR9P51686 369 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 HDDC2Q7Z4H3 204 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 SULF2Q8IWU5 870 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 IZUMO1Q8IYV9 350 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 C19orf18Q8NEA5 215 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 OR2M7Q8NG81 312 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 OR10S1Q8NGN2 331 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 ANGPTL6Q8NI99 470 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 ABRACLQ9P1F3 81 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 ASH2LQ9UBL3 628 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 PHF3Q92576 2039 aaKnown RBP16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 TRBV5-7A0A0A0MS05 114 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 ARGFXA6NJG6 315 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 FAM166BA8MTA8 275 aa16.24■□□□□ 0.19
SDR39U1-220ENST00000556548 TLX3O43711 291 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms