RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 OR10H3O60404 316 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CTNSO60931 367 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 STX11O75558 287 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DIRAS1O95057 198 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ECDO95905 644 aaPredicted RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 TOMM40O96008 361 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 STATHP02808 62 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 GLAP06280 429 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DBIP07108 87 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 SFTPBP07988 381 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PSG1P11464 419 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PVRP15151 417 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 B4GALT1P15291 398 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 NT5EP21589 574 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PTGER4P35408 488 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 GGT2P36268 569 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 OR1E2P47887 323 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 RAB9AP51151 201 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ARHGDIBP52566 201 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CRYBA2P53672 197 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PSMD4P55036 377 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 TMBIM6P55061 237 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 MAZP56270 477 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 SEC61GP60059 68 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ISL1P61371 349 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CD47Q08722 323 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 FGL1Q08830 312 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PMPCAQ10713 525 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ST3GAL3Q11203 375 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 STX4Q12846 297 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DYNC1I2Q13409 638 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 ILKQ13418 452 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 TRAM2Q15035 370 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 NPTX1Q15818 432 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DUSP7Q16829 419 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 TMEM44Q2T9K0 475 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CNPY1Q3B7I2 92 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ALKBH6Q3KRA9 238 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 FGD3Q5JSP0 725 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 MLIPQ5VWP3 458 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PLCXD3Q63HM9 321 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 FRMPD2BQ6IN97 320 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DHRS13Q6UX07 377 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 TMPRSS11FQ6ZWK6 438 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SATL1Q86VE3 508 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 RANBP3LQ86VV4 465 aaPredicted RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 ERI1Q8IV48 349 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 CA13Q8N1Q1 262 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SMYD1Q8NB12 490 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 OR10Q1Q8NGQ4 319 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 OR9A2Q8NGT5 310 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 KCNG3Q8TAE7 436 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 GPX8Q8TED1 209 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 APOBEC4Q8WW27 367 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 TRUB1Q8WWH5 349 aaKnown RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 RAB1CQ92928 201 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 MYDGFQ969H8 173 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SLC38A4Q969I6 547 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SLC35B4Q969S0 331 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 Q96MT0 163 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 NODALQ96S42 347 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 MAP3K3Q99759 626 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 DGCR6LQ9BY27 220 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 UCK2Q9BZX2 261 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 STRADBQ9C0K7 418 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 YIPF3Q9GZM5 350 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 SLC38A1Q9H2H9 487 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 NMNAT1Q9HAN9 279 aaPredicted RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 ACER3Q9NUN7 267 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ACOXLQ9NUZ1 547 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 C14orf105Q9NVL8 296 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CLN6Q9NWW5 311 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 IMPAD1Q9NX62 359 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CTSFQ9UBX1 484 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 ERRFI1Q9UJM3 462 aaPredicted RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 CFL2Q9Y281 166 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 B3GALT5Q9Y2C3 310 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 WDR45Q9Y484 360 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 MMACHCQ9Y4U1 282 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 PCDHGB1Q9Y5G3 927 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 KLF2Q9Y5W3 355 aaPredicted RBP4.53□□□□□ -1.68
SRP54-211ENST00000556445 TMEM131Q92545 1883 aa4.53□□□□□ -1.68
SRP54-211ENST00000556445 CACNA1IQ9P0X4 2223 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PCNTO95613 3336 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 A0A0G2JK05 382 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 IRGMA1A4Y4 181 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 METTL21EPA6NDL7 271 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 EFCAB10A6NFE3 127 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ZNF814B7Z6K7 855 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 TMEM150CB9EJG8 249 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 NPIPA2E9PIF3 369 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 E9PQ18 207 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 M0R3G1 203 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 FGF17O60258 216 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PRKRAO75569 313 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 OR5F1O95221 314 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 SYNGR4O95473 234 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CLIC3O95833 236 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 C1QCP02747 245 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms