RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 NARFLQ9H6Q4 476 aa15.73■□□□□ 0.11
NEDD1-208ENST00000555806 ELOVL3Q9HB03 270 aa15.73■□□□□ 0.11
NEDD1-208ENST00000555806 IL1RAPQ9NPH3 570 aa15.73■□□□□ 0.11
NEDD1-208ENST00000555806 ZNF275Q9NSD4 429 aaPredicted RBP15.73■□□□□ 0.11
NEDD1-208ENST00000555806 POLR1DQ9Y2S0 133 aa15.73■□□□□ 0.11
NEDD1-208ENST00000555806 PPIHO43447 177 aaKnown RBP15.72■□□□□ 0.11
NEDD1-208ENST00000555806 SGCEO43556 437 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 CDC14BO60729 498 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 ABHD16AO95870 558 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 TXNDC12O95881 172 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 IGHV3-13P01766 116 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 FAM157CP0CG43 387 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 FPR3P25089 353 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 CDKN2AP42771 156 aaKnown RBP15.72■□□□□ 0.11
NEDD1-208ENST00000555806 MRPS11P82912 194 aaKnown RBP15.72■□□□□ 0.11
NEDD1-208ENST00000555806 DNM1P34Q6PK57 102 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 ARL9Q6T311 187 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 JAZF1Q86VZ6 243 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 GLB1L2Q8IW92 636 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 C1orf174Q8IYL3 243 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 CCDC197Q8NCU1 140 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 KLF14Q8TD94 323 aaPredicted RBP15.72■□□□□ 0.11
NEDD1-208ENST00000555806 HPS1Q92902 700 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 MARS2Q96GW9 593 aaKnown RBP15.72■□□□□ 0.11
NEDD1-208ENST00000555806 NUAK2Q9H093 628 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 DECR2Q9NUI1 292 aa15.72■□□□□ 0.11
NEDD1-208ENST00000555806 MALRD1Q5VYJ5 2156 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 PLSCR5A0PG75 271 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 DYNC1I1O14576 645 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 MPZL1O95297 269 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 NGFP01138 241 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 COX5BP10606 129 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 ATP6V1B2P21281 511 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 ZNF81P51508 661 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 AQP6Q13520 282 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 TSTQ16762 297 aaKnown RBP15.71■□□□□ 0.11
NEDD1-208ENST00000555806 RFX4Q33E94 735 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 MBNL2Q5VZF2 373 aaKnown RBP15.71■□□□□ 0.11
NEDD1-208ENST00000555806 IL17RELQ6ZVW7 336 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.71■□□□□ 0.11
NEDD1-208ENST00000555806 LINC01356Q8N9X3 169 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 SAMD8Q96LT4 415 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 IFT27Q9BW83 186 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 PLEK2Q9NYT0 353 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 ACTR3BQ9P1U1 418 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 ASH2LQ9UBL3 628 aa15.71■□□□□ 0.11
NEDD1-208ENST00000555806 SPRY3O43610 288 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 FAM107AO95990 144 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 RENP00797 406 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 HNF1AP20823 631 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 NOS3P29474 1203 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 CRABP1P29762 137 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 TMEM33P57088 247 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 LSM6P62312 80 aaKnown RBP15.7■□□□□ 0.1
NEDD1-208ENST00000555806 TEKQ02763 1124 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 MTX3Q5HYI7 312 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 FAM120AOSQ5T036 256 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 LEG1Q6P5S2 330 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 VASH1Q7L8A9 365 aaPredicted RBP15.7■□□□□ 0.1
NEDD1-208ENST00000555806 GNPDA2Q8TDQ7 276 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 TSSK2Q96PF2 358 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 MDFIQ99750 246 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 SAP30LQ9HAJ7 183 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 NKIRAS2Q9NYR9 191 aa15.7■□□□□ 0.1
NEDD1-208ENST00000555806 H3BSA7 217 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 TNFRSF11BO00300 401 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 ICMTO60725 284 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 RP2O75695 350 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 KRT36O76013 467 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 GPANK1O95872 356 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 CALB2P22676 271 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 GSSP48637 474 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 CDH15P55291 814 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 TMEM255AQ5JRV8 349 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 PGBD2Q6P3X8 592 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 USP51Q70EK9 711 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 ARHGAP24Q8N264 748 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 OR4K13Q8NH42 304 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 CLDND2Q8NHS1 167 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 NMNAT3Q96T66 252 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 MUC13Q9H3R2 512 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 CYSLTR2Q9NS75 346 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 GRIP1Q9Y3R0 1128 aa15.69■□□□□ 0.1
NEDD1-208ENST00000555806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■■■□□ 15.8
NEDD1-208ENST00000555806 IGHV1-69-2A0A0G2JMI3 117 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 ZSCAN5BA6NJL1 495 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 DCTN6O00399 190 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 ARPC3O15145 178 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 TIMM8AO60220 97 aaPredicted RBP15.68■□□□□ 0.1
NEDD1-208ENST00000555806 HIST1H1CP16403 213 aaKnown RBP15.68■□□□□ 0.1
NEDD1-208ENST00000555806 SRD5A1P18405 259 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 GSTM3P21266 225 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 TSPAN31Q12999 210 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 MEP1BQ16820 701 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 CR1LQ2VPA4 569 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 FAM209AQ5JX71 171 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 C1orf94Q6P1W5 598 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 PGM2L1Q6PCE3 622 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 ZNF620Q6ZNG0 422 aa15.68■□□□□ 0.1
NEDD1-208ENST00000555806 RINLQ6ZS11 566 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms