RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 HPS1Q92902 700 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 KISS1RQ969F8 398 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ALG8Q9BVK2 526 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 RBM24Q9BX46 236 aaKnown RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 SLC19A3Q9BZV2 496 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 MIXL1Q9H2W2 232 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 TPK1Q9H3S4 243 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ABCB9Q9NP78 766 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 EMC3Q9P0I2 261 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 KLHL21Q9UJP4 597 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ING1Q9UK53 422 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-213ENST00000555386 ITGB1BP2Q9UKP3 347 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 TBC1D24Q9ULP9 559 aa8.72□□□□□ -1.01
PSEN1-213ENST00000555386 DAPL1A0PJW8 107 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 CCDC182A6NF36 153 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF716A6NP11 495 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 RNF13O43567 381 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 DNPH1O43598 174 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 OR7A10O76100 309 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 IL18BPO95998 194 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 LALBAP00709 142 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 CLEC2LP0C7M8 214 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 IL7P13232 177 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 HLA-DOBP13765 273 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF43P17038 809 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 AGAP20933 346 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 CD79BP40259 229 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 ASCL1P50553 236 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 CLDN17P56750 224 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 H3F3AP84243 136 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 SLC17A1Q14916 467 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 CARD17Q5XLA6 110 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 FAM131AQ6UXB0 335 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 THSD4Q6ZMP0 1018 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 NANOGNBQ7Z5D8 188 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 OAFQ86UD1 273 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 KLBQ86Z14 1044 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 IL17RDQ8NFM7 739 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 OR6K3Q8NGY3 331 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 OR5J2Q8NH18 312 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 PTP4A1Q93096 173 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.01
PSEN1-213ENST00000555386 DIRAS2Q96HU8 199 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 ZNF385AQ96PM9 386 aaKnown RBP8.71□□□□□ -1.01
PSEN1-213ENST00000555386 TEAD3Q99594 435 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 PIGMQ9H3S5 423 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 GLRX2Q9NS18 164 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 C14orf119Q9NWQ9 140 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 IL20RAQ9UHF4 553 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 PRSS50Q9UI38 385 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 RASD1Q9Y272 281 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 NOX1Q9Y5S8 564 aa8.71□□□□□ -1.01
PSEN1-213ENST00000555386 CACNA1DQ01668 2161 aa8.71□□□□□ -1.02
PSEN1-213ENST00000555386 TRAV27A0A087WT01 109 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 FAM183AA6NL82 134 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 MS4A18H0YCH9 400 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 PLPP3O14495 311 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 GPR171O14626 319 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 PLPP2O43688 288 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 IDH3BO43837 385 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 MRPL33O75394 65 aaKnown RBP8.7□□□□□ -1.02
PSEN1-213ENST00000555386 NDUFB2O95178 105 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 MT-ATP6P00846 226 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 HLA-DQB1P01920 261 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 F13BP05160 661 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 CRHP06850 196 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 SBK2P0C263 348 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 TRAPPC2P0DI81 140 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 TRAPPC2BP0DI82 140 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 SPNP16150 400 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 NTF4P34130 210 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 P2RY4P51582 365 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 POU3F1Q03052 451 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-213ENST00000555386 LGALS3BPQ08380 585 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 PUDPQ08623 228 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 FAM27E3Q08E93 113 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 MFSD13AQ14CX5 517 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 GUSBP1Q15486 140 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 TSC22D1Q15714 1073 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 MS4A18Q3C1V0 323 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF362Q5T0B9 420 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-213ENST00000555386 LCN1P1Q5VSP4 162 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 C9orf135Q5VTT2 229 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 AGAP6Q5VW22 663 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF544Q6NX49 715 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 ZNF474Q6S9Z5 364 aaPredicted RBP8.7□□□□□ -1.02
PSEN1-213ENST00000555386 AAED1Q7RTV5 226 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 TPRA1Q86W33 373 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 UEVLDQ8IX04 471 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 POMGNT2Q8NAT1 580 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 OR51A7Q8NH64 312 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 OTULINQ96BN8 352 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 MRPL48Q96GC5 212 aaKnown RBP8.7□□□□□ -1.02
PSEN1-213ENST00000555386 PSMG3-AS1Q96PY0 264 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 ATF6BQ99941 703 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 SOSTQ9BQB4 213 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 EMC6Q9BV81 110 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 TMED9Q9BVK6 235 aa8.7□□□□□ -1.02
PSEN1-213ENST00000555386 SLC22A4Q9H015 551 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms