RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
NEK9-204ENST00000554258 UNC119BA6NIH7 251 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 GPR171O14626 319 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 ZNF26P17031 533 aaPredicted RBP14.37□□□□□ -0.11
NEK9-204ENST00000554258 CDH2P19022 906 aaPredicted RBP14.37□□□□□ -0.11
NEK9-204ENST00000554258 GSTM3P21266 225 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 GTF2E2P29084 291 aaKnown RBP14.37□□□□□ -0.11
NEK9-204ENST00000554258 CALCRP30988 508 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 NTF4P34130 210 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 DAPP51397 102 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 RAG2P55895 527 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 FXYD6P3P58550 94 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 PUDPQ08623 228 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 HIKESHIQ53FT3 197 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 TMEM225Q6GV28 225 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 C11orf87Q6NUJ2 197 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 RASSF6Q6ZTQ3 369 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 PXKQ7Z7A4 578 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 EPHX4Q8IUS5 362 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 CLDN22Q8N7P3 220 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 OR13C2Q8NGS9 318 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 NIPSNAP1Q9BPW8 284 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 ZNF416Q9BWM5 594 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 PLEK2Q9NYT0 353 aa14.37□□□□□ -0.11
NEK9-204ENST00000554258 NPIPB13A6NJU9 1138 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 NPIPB4C9JG80 1138 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 BAG2O95816 211 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 CECR9P0C854 216 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 ADORA3P0DMS8 318 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 AQP2P41181 271 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 POU3F1Q03052 451 aaPredicted RBP14.36□□□□□ -0.11
NEK9-204ENST00000554258 HGFACQ04756 655 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 RPL18Q07020 188 aaKnown RBP14.36□□□□□ -0.11
NEK9-204ENST00000554258 HLXQ14774 488 aaPredicted RBP14.36□□□□□ -0.11
NEK9-204ENST00000554258 KDM4DQ6B0I6 523 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 ANKRD16Q6P6B7 361 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 CASP12Q6UXS9 341 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 CREB3L2Q70SY1 520 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 NANOGNBQ7Z5D8 188 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 KDM8Q8N371 416 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 OR9K2Q8NGE7 335 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 OR51A7Q8NH64 312 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 MOSPD2Q8NHP6 518 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 DNAJC9Q8WXX5 260 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 GTF3AQ92664 365 aaKnown RBP14.36□□□□□ -0.11
NEK9-204ENST00000554258 YIPF5Q969M3 257 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 GPX7Q96SL4 187 aaPredicted RBP14.36□□□□□ -0.11
NEK9-204ENST00000554258 OBP2BQ9NPH6 170 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 SLC7A10Q9NS82 523 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 IL20Q9NYY1 176 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 REV1Q9UBZ9 1251 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 NOX1Q9Y5S8 564 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 FLVCR1Q9Y5Y0 555 aa14.36□□□□□ -0.11
NEK9-204ENST00000554258 TRAV27A0A087WT01 109 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 H0YHG0 523 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 BLOC1S5-TXNDC5H3BN57 136 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 M0R233 179 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 CASQ2O14958 399 aaPredicted RBP14.35□□□□□ -0.11
NEK9-204ENST00000554258 TRAF3IP2O43734 574 aaPredicted RBP14.35□□□□□ -0.11
NEK9-204ENST00000554258 OR6A2O95222 327 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 MPGP29372 298 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 RFX4Q33E94 735 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 RUSC1-AS1Q66K80 236 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 ZNF620Q6ZNG0 422 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 ICA1LQ8NDH6 482 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 ANKK1Q8NFD2 765 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 TMEM45BQ96B21 275 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 RNPEPL1Q9HAU8 725 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 USE1Q9NZ43 259 aa14.35□□□□□ -0.11
NEK9-204ENST00000554258 NKX1-2Q9UD57 310 aaPredicted RBP14.35□□□□□ -0.11
NEK9-204ENST00000554258 DNAH3Q8TD57 4116 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 CLPSL1A2RUU4 121 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 SAC3D1A6NKF1 404 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 SYNGR3O43761 229 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 NDUFB2O95178 105 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 CRYBA1P05813 215 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 HLA-DOBP13765 273 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 SELEP16581 610 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 ZNF43P17038 809 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 ALG10Q5BKT4 473 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 SAMD5Q5TGI4 173 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 SMARCD3Q6STE5 483 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 MS4A5Q9H3V2 200 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 SMURF2Q9HAU4 748 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 INIPQ9NRY2 104 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 CDH10Q9Y6N8 788 aa14.34□□□□□ -0.11
NEK9-204ENST00000554258 OR6C65A6NJZ3 312 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 RNF13O43567 381 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 ZNF432O94892 652 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 NGFP01138 241 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 IGHMP01871 453 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 MVKQ03426 396 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 SLC34A1Q06495 639 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 TAF11Q15544 211 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 AVPI1Q5T686 147 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 RPL13AP3Q6NVV1 102 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 DPY19L2P2Q6ZN68 376 aa14.33□□□□□ -0.12
NEK9-204ENST00000554258 GPAT4Q86UL3 456 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms