RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 BCL2L14Q9BZR8 327 aa15.51■□□□□ 0.07
SHMT2-206ENST00000553529 SHARPINQ9H0F6 387 aa15.51■□□□□ 0.07
SHMT2-206ENST00000553529 C1orf198Q9H425 327 aa15.51■□□□□ 0.07
SHMT2-206ENST00000553529 VSX1Q9NZR4 365 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-206ENST00000553529 ASH2LQ9UBL3 628 aa15.51■□□□□ 0.07
SHMT2-206ENST00000553529 KCNS2Q9ULS6 477 aa15.51■□□□□ 0.07
SHMT2-206ENST00000553529 TIMM10BQ9Y5J6 103 aa15.51■□□□□ 0.07
SHMT2-206ENST00000553529 HTR3EA5X5Y0 456 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 PPIHO43447 177 aaKnown RBP15.5■□□□□ 0.07
SHMT2-206ENST00000553529 OR10H3O60404 316 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 IGHV3-13P01766 116 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 FABP3P05413 133 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 FAM157CP0CG43 387 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 T-ENOLP0DO92 83 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 GAAP10253 952 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 HTR5AP47898 357 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 CENPAP49450 140 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 PGBD2Q6P3X8 592 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 LYPD4Q6UWN0 246 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 USP51Q70EK9 711 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 CXXC5Q7LFL8 322 aaKnown RBP15.5■□□□□ 0.07
SHMT2-206ENST00000553529 ZDHHC21Q8IVQ6 265 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 PHC2Q8IXK0 858 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 C4orf45Q96LM5 186 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 BTBD10Q9BSF8 475 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 PLA2G12AQ9BZM1 189 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 RACGAP1Q9H0H5 632 aa15.5■□□□□ 0.07
SHMT2-206ENST00000553529 B2RBV5 119 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 ENTPD5O75356 428 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 PTHP01270 115 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 HIST1H1CP16403 213 aaKnown RBP15.49■□□□□ 0.07
SHMT2-206ENST00000553529 ACHEP22303 614 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 RPS27P42677 84 aaKnown RBP15.49■□□□□ 0.07
SHMT2-206ENST00000553529 CDH15P55291 814 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 KRT72Q14CN4 511 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 ANKDD1AQ495B1 522 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 CLEC12AQ5QGZ9 265 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 SLC35F1Q5T1Q4 408 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 LEG1Q6P5S2 330 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 TMEM154Q6P9G4 183 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 SMARCD3Q6STE5 483 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 LINC00346Q8IVM7 164 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 OR6V1Q8N148 313 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 SDR9C7Q8NEX9 313 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 OR8D4Q8NGM9 314 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 LRMDAQ9H2I8 198 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 SRA1Q9HD15 236 aaKnown RBP15.49■□□□□ 0.07
SHMT2-206ENST00000553529 CDC42EP3Q9UKI2 254 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 STARD10Q9Y365 291 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 LHFPL6Q9Y693 200 aa15.49■□□□□ 0.07
SHMT2-206ENST00000553529 IGLV1-36A0A0B4J1U3 117 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 C12orf71A8MTZ7 269 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 PHF1O43189 567 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-206ENST00000553529 SGCEO43556 437 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 GMNNO75496 209 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 KHDRBS3O75525 346 aaKnown RBP15.48■□□□□ 0.07
SHMT2-206ENST00000553529 DCTN3O75935 186 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 TXNDC12O95881 172 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 ZNF81P51508 661 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 PSG7Q13046 419 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 HLXQ14774 488 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-206ENST00000553529 RFX4Q33E94 735 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 MBNL2Q5VZF2 373 aaKnown RBP15.48■□□□□ 0.07
SHMT2-206ENST00000553529 C16orf89Q6UX73 402 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 DPY19L2P2Q6ZN68 376 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 Q6ZR03 302 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 OR4C15Q8NGM1 316 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 SNX33Q8WV41 574 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 C1orf159Q96HA4 380 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 IL1RAPQ9NPH3 570 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 PLEK2Q9NYT0 353 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 GRIP1Q9Y3R0 1128 aa15.48■□□□□ 0.07
SHMT2-206ENST00000553529 IGHV3-64DA0A0J9YX35 117 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 OR6C68A6NDL8 312 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 RNF212BA8MTL3 300 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 TPD52L2O43399 206 aaKnown RBP15.47■□□□□ 0.07
SHMT2-206ENST00000553529 ABHD16AO95870 558 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 TFP02787 698 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 NR2C1P13056 603 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 GCH1P30793 250 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 GSSP48637 474 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 LMO4P61968 165 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 ZNF718Q3SXZ3 478 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 ZNF620Q6ZNG0 422 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 CFAP77Q6ZQR2 320 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 GLB1L2Q8IW92 636 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 OR5AS1Q8N127 324 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 LINC01356Q8N9X3 169 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 ZNF540Q8NDQ6 660 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 IFT27Q9BW83 186 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 WDR76Q9H967 626 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 RPRD1BQ9NQG5 326 aaKnown RBP15.47■□□□□ 0.07
SHMT2-206ENST00000553529 TMEM160Q9NX00 188 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 SLCO1C1Q9NYB5 712 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 EIF3KQ9UBQ5 218 aaKnown RBP15.47■□□□□ 0.07
SHMT2-206ENST00000553529 FBXO9Q9UK97 447 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-206ENST00000553529 B9D1Q9UPM9 204 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 LYVE1Q9Y5Y7 322 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 TANC2Q9HCD6 1990 aa15.47■□□□□ 0.07
SHMT2-206ENST00000553529 IGHV1-69-2A0A0G2JMI3 117 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms