RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C7orf50Q9BRJ6 194 aaKnown RBP6.5□□□□□ -1.37
ATXN3-221ENST00000553498 PPIL3Q9H2H8 161 aaKnown RBP6.5□□□□□ -1.37
ATXN3-221ENST00000553498 NOX4Q9NPH5 578 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 LRFN1Q9P244 771 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 EXTL2Q9UBQ6 330 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 CYB5R1Q9UHQ9 305 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 HHLA2Q9UM44 414 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 CAMK2AQ9UQM7 478 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 DNAH14Q0VDD8 3507 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 SCN3AQ9NY46 2000 aa6.5□□□□□ -1.37
ATXN3-221ENST00000553498 A0A1W2PNU3 283 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 A0A1W2PQ09 198 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 OR6C65A6NJZ3 312 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 PRR32B1ATL7 298 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ZNF878C9JN71 531 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 PIN1P1O15428 100 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 GSTZ1O43708 216 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 FBXO24O75426 580 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 SRSF10O75494 262 aaKnown RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 NCR1O76036 304 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 RPP14O95059 124 aaKnown RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 HPNP05981 417 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CSF3P09919 207 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 H2BFMP0C1H6 154 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 TRAPPC2P0DI81 140 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 TRAPPC2BP0DI82 140 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CD37P11049 281 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ELK1P19419 428 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 SPINK2P20155 84 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CSRP1P21291 193 aaKnown RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ENPP1P22413 925 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CTSSP25774 331 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 SFTPDP35247 375 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 INPP1P49441 399 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 MMP15P51511 669 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CAV3P56539 151 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 B3GALT5-AS1P59052 145 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 RPS18P62269 152 aaKnown RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 GRB2P62993 217 aaKnown RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 OC90Q02509 493 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ID3Q02535 119 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 INPP5JQ15735 1006 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 BAK1Q16611 211 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 HYAL4Q2M3T9 481 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 NRN1LQ496H8 165 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 WDR38Q5JTN6 314 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 FAM27D1Q5T7N8 215 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 STPG1Q5TH74 334 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CCBE1Q6UXH8 406 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 STAC2Q6ZMT1 411 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 GDPD3Q7L5L3 318 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 DCXRQ7Z4W1 244 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 MDGA2Q7Z553 956 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 GPAT4Q86UL3 456 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 NR2C2APQ86WQ0 139 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ZNF227Q86WZ6 799 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 DTX1Q86Y01 620 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CDH26Q8IXH8 852 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 BEST3Q8N1M1 668 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 KDM8Q8N371 416 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 PRSS35Q8N3Z0 413 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 NKAIN3Q8N8D7 197 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 OR9K2Q8NGE7 335 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 OR14L1PQ8NHC6 308 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ZNF671Q8TAW3 534 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 C11orf40Q8WZ69 217 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 RGP1Q92546 391 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 NKD1Q969G9 470 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 TMEM54Q969K7 222 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ITFG2Q969R8 447 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CPNE4Q96A23 557 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 TMEM106AQ96A25 262 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 TXNDC15Q96J42 360 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 JSRP1Q96MG2 331 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ABCG5Q9H222 651 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 B3GAT2Q9NPZ5 323 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 SLC17A5Q9NRA2 495 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 ZNF275Q9NSD4 429 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 RBFOX1Q9NWB1 397 aaKnown RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 MED29Q9NX70 200 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 GLTPQ9NZD2 209 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 TBC1D24Q9ULP9 559 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 DHDHQ9UQ10 334 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 KLF13Q9Y2Y9 288 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-221ENST00000553498 LRP12Q9Y561 859 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 CACNA1EQ15878 2313 aa6.49□□□□□ -1.37
ATXN3-221ENST00000553498 hCG_2014768A0A024R1R8 64 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 A0A0A6YYH2 397 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 LOC101059948A0A1B0GTJ6 334 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 TMEM269A0A1B0GVZ9 245 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 A6NJ64 397 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 LRRC3CA6NJW4 275 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ANXA2P2A6NMY6 339 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CENPXA8MT69 81 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 CDRT15L2A8MXV6 281 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 KLRC4-KLRK1H3BQV0 150 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 MAGEB3O15480 346 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 MAGEB4O15481 346 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-221ENST00000553498 SLC43A1O75387 559 aa6.48□□□□□ -1.37
ATXN3-221ENST00000553498 ANXA2P07355 339 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms