RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 FAM25EA8MYX2 175 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 PLGP00747 810 aaPredicted RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 TNFP01375 233 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 BGLAPP02818 100 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CLPSP04118 112 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CD37P11049 281 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 DNASE1L1P49184 302 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 YPEL5P62699 121 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 MOGAT2Q3SYC2 334 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CDNFQ49AH0 187 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 POMZP3Q6PJE2 187 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 SVBPQ8N300 66 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 OR4S1Q8NGB4 309 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 OR1S2Q8NGQ3 325 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 GPBAR1Q8TDU6 330 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 HERVK_113Q902F9 699 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 KLHDC3Q9BQ90 382 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 S1PR5Q9H228 398 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 MRPL22Q9NWU5 206 aaKnown RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 KLF2Q9Y5W3 355 aaPredicted RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 OR5K4A6NMS3 321 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 OR2AT4A6NND4 320 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 LDLRAD4O15165 306 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 NUDT21O43809 227 aaKnown RBP15.77■□□□□ 0.12
SYNE3-202ENST00000553340 MTRF1O75570 445 aaKnown RBP15.77■□□□□ 0.12
SYNE3-202ENST00000553340 DCNP07585 359 aaKnown RBP15.77■□□□□ 0.12
SYNE3-202ENST00000553340 BDKRB2P30411 391 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 HSD17B7P56937 341 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 Q6ZSR6 202 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 OR51A2Q8NGJ7 313 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 FAM174AQ8TBP5 190 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 BADQ92934 168 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 C8orf44Q96CB5 159 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 PHB2Q99623 299 aa15.77■□□□□ 0.12
SYNE3-202ENST00000553340 TRAV36DV7A0A075B6V5 113 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 TMEM218A2RU14 115 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 FITM1A5D6W6 292 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 SULT2B1O00204 365 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 GMFGO60234 142 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 KLF8O95600 359 aaPredicted RBP15.77■□□□□ 0.11
SYNE3-202ENST00000553340 H2AFB1P0C5Y9 115 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 SLC6A8P48029 635 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 RPL27P61353 136 aaKnown RBP15.77■□□□□ 0.11
SYNE3-202ENST00000553340 SPOCK1Q08629 439 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 GPM6BQ13491 265 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 PPP1R1AQ13522 171 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 EIF2B1Q14232 305 aaKnown RBP15.77■□□□□ 0.11
SYNE3-202ENST00000553340 INPP5JQ15735 1006 aaPredicted RBP15.77■□□□□ 0.11
SYNE3-202ENST00000553340 ACKR1Q16570 336 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 SHEQ5VZ18 495 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 OR10K2Q6IF99 312 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 MAMDC2Q7Z304 686 aaPredicted RBP15.77■□□□□ 0.11
SYNE3-202ENST00000553340 OR13C3Q8NGS6 347 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 MITD1Q8WV92 249 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 PTX4Q96A99 478 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 ABHD6Q9BV23 337 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 NUDT9Q9BW91 350 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 CST11Q9H112 138 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 ASF1BQ9NVP2 202 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 HHLA2Q9UM44 414 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 LRP12Q9Y561 859 aa15.77■□□□□ 0.11
SYNE3-202ENST00000553340 C17orf105B2RV13 164 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 EIF1AYO14602 144 aaKnown RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 NSA2O95478 260 aaKnown RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 GLULP15104 373 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 EIF1AXP47813 144 aaKnown RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 IL13RA1P78552 427 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 C1QL3Q5VWW1 255 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 FAM160A2Q8N612 972 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 PHOSPHO2Q8TCD6 241 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 SLC25A36Q96CQ1 311 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 LAT2Q9GZY6 243 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 TCEAL2Q9H3H9 227 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 GMEB2Q9UKD1 530 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 LOC100509620A0A075B734 347 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 C9orf170A2RU37 121 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 METTL21EPA6NDL7 271 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 GPR31O00270 319 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 IL2RAP01589 272 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 PPICP45877 212 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 INSM1Q01101 510 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 PHF19Q5T6S3 580 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 CORO6Q6QEF8 472 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 ZDHHC22Q8N966 263 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 ACBD4Q8NC06 268 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 MMABQ96EY8 250 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 NXF5Q9H1B4 397 aaKnown RBP15.76■□□□□ 0.11
SYNE3-202ENST00000553340 MLXQ9UH92 298 aa15.76■□□□□ 0.11
SYNE3-202ENST00000553340 IGLV1-36A0A0B4J1U3 117 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 HCRTR2O43614 444 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 AKT2P31751 481 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 HHEXQ03014 270 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 SERTAD2Q14140 314 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 RAB12Q6IQ22 244 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 PARM1Q6UWI2 310 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 MDGA2Q7Z553 956 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF519Q8TB69 540 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 FGF14Q92915 247 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 NKD1Q969G9 470 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 ADOQ96SZ5 270 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms