RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 DANCRP0C864 163 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 CD53P19397 219 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 CDAP32320 146 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 HTR5AP47898 357 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 DAPP51397 102 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 UCP2P55851 309 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 TPTEP56180 551 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 LCN6P62502 163 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 ADAM8P78325 824 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PSG4Q00888 419 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 POU4F2Q12837 409 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PPP1R8Q12972 351 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PTGES3Q15185 160 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 ELFN2Q5R3F8 820 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 RGS7BPQ6MZT1 257 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 KCTD18Q6PI47 426 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 ZBTB49Q6ZSB9 765 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 AMIGO2Q86SJ2 522 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PACRGLQ8N7B6 248 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC37A3Q8NCC5 494 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 KBTBD8Q8NFY9 601 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 SLC26A10Q8NG04 563 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 OR8J1Q8NGP2 316 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 OR6K6Q8NGW6 343 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 SNX33Q8WV41 574 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 MRPL48Q96GC5 212 aaKnown RBP8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 Q96MT0 163 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 HS3ST6Q96QI5 342 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 DIRC2Q96SL1 478 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 INTS14Q96SY0 518 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PITX2Q99697 317 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 GABARAPL3Q9BY60 117 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PLA2G12AQ9BZM1 189 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 NMNAT2Q9BZQ4 307 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 CXXC4Q9H2H0 198 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 VCX3BQ9H321 246 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 PLK3Q9H4B4 646 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 OPA3Q9H6K4 179 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 DCLRE1BQ9H816 532 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 ZNF701Q9NV72 531 aaPredicted RBP8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 ASH2LQ9UBL3 628 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 CYB5R1Q9UHQ9 305 aa8.9□□□□□ -0.98
TRAFD1-208ENST00000552890 DSCAMO60469 2012 aa8.9□□□□□ -0.99
TRAFD1-208ENST00000552890 TEX15Q9BXT5 2789 aa8.9□□□□□ -0.99
TRAFD1-208ENST00000552890 ARID1AO14497 2285 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 FAM171A2A8MVW0 826 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 E7EQL1 145 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 HAX1O00165 279 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 SYNGR3O43761 229 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 BAG2O95816 211 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ABHD16AO95870 558 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 OR4A8P0C604 315 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 SELEP16581 610 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 SPI1P17947 270 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PRKACGP22612 351 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 CFL1P23528 166 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 GSTT1P30711 240 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ENTPD1P49961 510 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PPOXP50336 477 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ART1P52961 327 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 KLF3P57682 345 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 GRB2P62993 217 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 TUBA1BP68363 451 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 TUBA4AP68366 448 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PPP2R2BQ00005 443 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 MALLQ13021 153 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 SNTB2Q13425 540 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 CRMP1Q14194 572 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ENDOGQ14249 297 aaKnown RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 TAF13Q15543 124 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PCGF3Q3KNV8 242 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 MEDAGQ5VYS4 303 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 SLX4IPQ5VYV7 408 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 SPNS3Q6ZMD2 512 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 TUBA1AQ71U36 451 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 TMEM179BQ7Z7N9 219 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 EGFL6Q8IUX8 553 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF540Q8NDQ6 660 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 OR1F12Q8NHA8 337 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 NEU4Q8WWR8 484 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ASB17Q8WXJ9 295 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 APOBEC3DQ96AK3 386 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 OTULINQ96BN8 352 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 FBXO17Q96EF6 278 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 POM121L2Q96KW2 1035 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF75AQ96N20 296 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 TRAF4Q9BUZ4 470 aaPredicted RBP8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 YIPF3Q9GZM5 350 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF224Q9NZL3 707 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 ZNF391Q9UJN7 358 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PLEKHA6Q9Y2H5 1048 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PCDHGB1Q9Y5G3 927 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 MYO9AB2RTY4 2548 aa8.89□□□□□ -0.99
TRAFD1-208ENST00000552890 PLSCR5A0PG75 271 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ZAR1LA6NP61 321 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 H0YHG0 523 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 OVOL3O00110 214 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 ALPLP05186 524 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 LCKP06239 509 aa8.88□□□□□ -0.99
TRAFD1-208ENST00000552890 RPSAP08865 295 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms