RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SLC24A3Q9HC58 644 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 PNRC2Q9NPJ4 139 aaKnown RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 IMPAD1Q9NX62 359 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 ASH2LQ9UBL3 628 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 GDF2Q9UK05 429 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 TIMM10BQ9Y5J6 103 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 NBPF19A0A087WUL8 3843 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 LOC100509620A0A075B734 347 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 SYNGR3O43761 229 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 CTAG2O75638 210 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 SERPINA5P05154 406 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 ZNF35P13682 527 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 PRF1P14222 555 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 ZNF823P16415 610 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 PTAFRP25105 342 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 APEX1P27695 318 aaKnown RBP11.31□□□□□ -0.6
RAB5C-206ENST00000550406 VHLP40337 213 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 BLVRAP53004 296 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 PCBD1P61457 104 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 RPS7P62081 194 aaKnown RBP11.31□□□□□ -0.6
RAB5C-206ENST00000550406 ADAM8P78325 824 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 GGTLC2Q14390 218 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 MAD2L1BPQ15013 274 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-206ENST00000550406 IZUMO2Q6UXV1 221 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 DPY19L4Q7Z388 723 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 ERI1Q8IV48 349 aaKnown RBP11.31□□□□□ -0.6
RAB5C-206ENST00000550406 DEPDC4Q8N2C3 294 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 PAQR4Q8N4S7 273 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-206ENST00000550406 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 INTS14Q96SY0 518 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 AMELYQ99218 206 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 VCXQ9H320 206 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 CCNB1IP1Q9NPC3 277 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 H2AFY2Q9P0M6 372 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-206ENST00000550406 KCNG2Q9UJ96 466 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 ABCA4P78363 2273 aa11.31□□□□□ -0.6
RAB5C-206ENST00000550406 IGHV2OR16-5A0A0B4J2B6 119 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 OR6C6A6NF89 314 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 SLC22A31A6NKX4 558 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 RAB36O95755 333 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 MRPL3P09001 348 aaKnown RBP11.3□□□□□ -0.6
RAB5C-206ENST00000550406 CCL2P13500 99 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 HTR1FP30939 366 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 NAA10P41227 235 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-206ENST00000550406 CDH11P55287 796 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 NAAAQ02083 359 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 HGFACQ04756 655 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 SCRN3Q0VDG4 424 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 IL18R1Q13478 541 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 SMN1Q16637 294 aaKnown RBP11.3□□□□□ -0.6
RAB5C-206ENST00000550406 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-206ENST00000550406 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 GID4Q8IVV7 300 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 GJC3Q8NFK1 279 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 CNIH3Q8TBE1 160 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 ST7LQ8TDW4 575 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 FBLIM1Q8WUP2 373 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 SLC7A6Q92536 515 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 ADGRL4Q9HBW9 690 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 KLHDC2Q9Y2U9 406 aa11.3□□□□□ -0.6
RAB5C-206ENST00000550406 HRNRQ86YZ3 2850 aaPredicted RBP11.3□□□□□ -0.6
RAB5C-206ENST00000550406 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 PRR32B1ATL7 298 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 ABCD4O14678 606 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 SGCEO43556 437 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 MPZL2O60487 215 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 APOL3O95236 402 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 GOSR1O95249 250 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 CD3EP07766 207 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 SPARCP09486 303 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 KRTAP10-9P60411 292 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 IL5RAQ01344 420 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 TLE4Q04727 773 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 KRTAP27-1Q3LI81 207 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 ELFN2Q5R3F8 820 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 LCN1P1Q5VSP4 162 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 MEDAGQ5VYS4 303 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 TMEM154Q6P9G4 183 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 SLC16A9Q7RTY1 509 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 DCXRQ7Z4W1 244 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 SLC30A7Q8NEW0 376 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 KBTBD8Q8NFY9 601 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 OR6N2Q8NGY6 317 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 OR1F12Q8NHA8 337 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 APOL4Q9BPW4 351 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 ABHD6Q9BV23 337 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 CDADC1Q9BWV3 514 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 ESRP2Q9H6T0 727 aaKnown RBP11.29□□□□□ -0.6
RAB5C-206ENST00000550406 MOV10Q9HCE1 1003 aaKnown RBP11.29□□□□□ -0.6
RAB5C-206ENST00000550406 WARS2Q9UGM6 360 aaKnown RBP11.29□□□□□ -0.6
RAB5C-206ENST00000550406 COPS3Q9UNS2 423 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 POLR1DQ9Y2S0 133 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms