RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FOXL2NBQ6ZUU3 175 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 RASSF5Q8WWW0 418 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 HAVCR1Q96D42 359 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 RBP7Q96R05 134 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 NKIRAS1Q9NYS0 192 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 ARMCX1Q9P291 453 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 RAB21Q9UL25 225 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 PPP1R3CQ9UQK1 317 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 LRCH1Q9Y2L9 728 aa8.27□□□□□ -1.09
TRAFD1-207ENST00000550051 KIR2DS1A0A191URI9 304 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 TMEM178BH3BS89 294 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 SURF4O15260 269 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 TIMM8AO60220 97 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 OPN1SWP03999 348 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 IGHV4-38-2P0DP08 117 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 LAP3P28838 519 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 MDH2P40926 338 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 GUCA1AP43080 201 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 BPIFB3P59826 476 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 CYP51A1Q16850 503 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 AGKQ53H12 422 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 ZNF774Q6NX45 483 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 Q6ZR03 302 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 CCDC80Q76M96 950 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 NKAIN4Q8IVV8 208 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 MUC20Q8N307 709 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 PARP8Q8N3A8 854 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 DPP10Q8N608 796 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 NPEPL1Q8NDH3 523 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 OR2Z1Q8NG97 314 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 MOSPD2Q8NHP6 518 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 VANGL1Q8TAA9 524 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 RAB40AQ8WXH6 277 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 NSMAFQ92636 917 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 DACT3Q96B18 629 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 TAMM41Q96BW9 452 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 SGTBQ96EQ0 304 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 THOC1Q96FV9 657 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 C7orf26Q96N11 449 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 ALG12Q9BV10 488 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 POLR2J2Q9GZM3 115 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 POLR2J3Q9H1A7 115 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 KAT8Q9H7Z6 458 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 OR5V1Q9UGF6 321 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 RIMS3Q9UJD0 308 aa8.26□□□□□ -1.09
TRAFD1-207ENST00000550051 C12orf71A8MTZ7 269 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 THRBP10828 461 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 GSTM3P21266 225 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 PCGF2P35227 344 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 GZMMP51124 257 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 CRYBA2P53672 197 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 MAGOHP61326 146 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 RPL27P61353 136 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 FMODQ06828 376 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 CD47Q08722 323 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 HNRNPA0Q13151 305 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 ENDOGQ14249 297 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 INTS11Q5TA45 600 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 FAM205BPQ63HN1 556 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 SLC27A4Q6P1M0 643 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 BTNL3Q6UXE8 466 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 POU5F2Q8N7G0 328 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 PFN4Q8NHR9 129 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 SLC26A7Q8TE54 656 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 TSPEARQ8WU66 669 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 TMEM239Q8WW34 195 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 TAF15Q92804 592 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 PTP4A1Q93096 173 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 ZBTB9Q96C00 473 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 TLCD1Q96CP7 247 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 MAGEB18Q96M61 343 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 COG8Q96MW5 612 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 CGREF1Q99674 301 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 CITED1Q99966 193 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 EBF4Q9BQW3 602 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 SSBP3Q9BWW4 388 aaPredicted RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 RABEP2Q9H5N1 569 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 BEX1Q9HBH7 125 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 TMEM165Q9HC07 324 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 GCM1Q9NP62 436 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 C20orf141Q9NUB4 165 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 PDP1Q9P0J1 537 aaPredicted RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 MIOXQ9UGB7 285 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 NDRG4Q9ULP0 352 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 HIF3AQ9Y2N7 669 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 STARD10Q9Y365 291 aa8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 SOX21Q9Y651 276 aaPredicted RBP8.25□□□□□ -1.09
TRAFD1-207ENST00000550051 IGHV2-70DA0A0C4DH43 119 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 FAM181BA6NEQ2 426 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 CEACAM18A8MTB9 384 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 SRRM5B3KS81 715 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 HOXA3O43365 443 aaPredicted RBP8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 NDUFA7O95182 113 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 OR5F1O95221 314 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 ABHD16AO95870 558 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 GPANK1O95872 356 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 KNG1P01042 644 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 MSR1P21757 451 aa8.24□□□□□ -1.09
TRAFD1-207ENST00000550051 OMGP23515 440 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms