RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TRAPPC2LH3BP13 241 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 IFNL4K9M1U5 179 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 RNASE1P07998 156 aaKnown RBP11.44□□□□□ -0.58
TROAP-211ENST00000549891 MTNR1AP48039 350 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 GZMMP51124 257 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 CTXN1P60606 82 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 ST3GAL3Q11203 375 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 PSG7Q13046 419 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 ANKDD1AQ495B1 522 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 BEND6Q5SZJ8 279 aaPredicted RBP11.44□□□□□ -0.58
TROAP-211ENST00000549891 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 ERICH5Q6P6B1 374 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 FOXL2NBQ6ZUU3 175 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 OR2Z1Q8NG97 314 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 BPIFA2Q96DR5 249 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 THOC1Q96FV9 657 aaKnown RBP11.44□□□□□ -0.58
TROAP-211ENST00000549891 DUX5Q96PT3 197 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 UNKLQ9H9P5 680 aaKnown RBP11.44□□□□□ -0.58
TROAP-211ENST00000549891 IL20RAQ9UHF4 553 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 PPP1R3CQ9UQK1 317 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 LRCH1Q9Y2L9 728 aa11.44□□□□□ -0.58
TROAP-211ENST00000549891 CLDN34H7C241 214 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 SHOX2O60902 331 aaPredicted RBP11.43□□□□□ -0.58
TROAP-211ENST00000549891 PPIAL4GP0DN37 164 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 IFI30P13284 250 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 TNFRSF1BP20333 461 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 KITLGP21583 273 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
TROAP-211ENST00000549891 OR1E2P47887 323 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 SCRN3Q0VDG4 424 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 ENDOGQ14249 297 aaKnown RBP11.43□□□□□ -0.58
TROAP-211ENST00000549891 ZMYND11Q15326 602 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 SPRNQ5BIV9 151 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 METTL21CQ5VZV1 264 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 OR8J3Q8NGG0 315 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 OR52E2Q8NGJ4 325 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 MAGEB18Q96M61 343 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 SIKE1Q9BRV8 207 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 DCAF16Q9NXF7 216 aa11.43□□□□□ -0.58
TROAP-211ENST00000549891 F5H0A9 414 aaPredicted RBP11.42□□□□□ -0.58
TROAP-211ENST00000549891 DOK2O60496 412 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 NPPAP01160 153 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 HTR5AP47898 357 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 GUCY1A3Q02108 690 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 KLF17Q5JT82 389 aaPredicted RBP11.42□□□□□ -0.58
TROAP-211ENST00000549891 SLC27A4Q6P1M0 643 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 BTNL3Q6UXE8 466 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 OAFQ86UD1 273 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 CALHM3Q86XJ0 350 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 BCL6BQ8N143 479 aaPredicted RBP11.42□□□□□ -0.58
TROAP-211ENST00000549891 CLDN22Q8N7P3 220 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 ITLN1Q8WWA0 313 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 PRRC1Q96M27 445 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 POLE4Q9NR33 117 aa11.42□□□□□ -0.58
TROAP-211ENST00000549891 INTS9Q9NV88 658 aaKnown RBP11.42□□□□□ -0.58
TROAP-211ENST00000549891 TMEM178BH3BS89 294 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 J3QW42 95 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 SGCEO43556 437 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 AHCYL1O43865 530 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 PIP5K1CO60331 668 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 SLC9A3P48764 834 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 SEC61A1P61619 476 aaKnown RBP11.41□□□□□ -0.58
TROAP-211ENST00000549891 PAX8Q06710 450 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 LRRC23Q53EV4 343 aaPredicted RBP11.41□□□□□ -0.58
TROAP-211ENST00000549891 RABL3Q5HYI8 236 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 LRRN1Q6UXK5 716 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 C9orf139Q6ZV77 190 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 IGFN1Q86VF2 1251 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 PARP8Q8N3A8 854 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 OR51A7Q8NH64 312 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 LZICQ8WZA0 190 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 PTP4A1Q93096 173 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 HAVCR1Q96D42 359 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 CMBLQ96DG6 245 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 TPD52L3Q96J77 140 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 C1orf147Q96MC9 270 aaPredicted RBP11.41□□□□□ -0.58
TROAP-211ENST00000549891 ZNF48Q96MX3 618 aaPredicted RBP11.41□□□□□ -0.58
TROAP-211ENST00000549891 OR2V2Q96R30 315 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 SIGLEC11Q96RL6 698 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 SSBP3Q9BWW4 388 aaPredicted RBP11.41□□□□□ -0.58
TROAP-211ENST00000549891 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 NDEL1Q9GZM8 345 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 GRHPRQ9UBQ7 328 aa11.41□□□□□ -0.58
TROAP-211ENST00000549891 FBP2O00757 339 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 XKRYO14609 159 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 RAC2P15153 192 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 RPS2P15880 293 aaKnown RBP11.4□□□□□ -0.58
TROAP-211ENST00000549891 RGS6P49758 472 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 MMP16P51512 607 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 GNB2P62879 340 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 SELENOWP63302 87 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 AQP6Q13520 282 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 SLC9A3R2Q15599 337 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 PDLIM3Q53GG5 364 aaPredicted RBP11.4□□□□□ -0.58
TROAP-211ENST00000549891 CYBRD1Q53TN4 286 aa11.4□□□□□ -0.58
TROAP-211ENST00000549891 COQ5Q5HYK3 327 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms