RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 OR5T3Q8NGG3 340 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 OR2T4Q8NH00 348 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 MMABQ96EY8 250 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ATXN7L3BQ96GX2 97 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 AGAP4Q96P64 663 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 FEVQ99581 238 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CIB1Q99828 191 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TTTY12Q9BZ98 90 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 OR52D1Q9H346 318 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 INIPQ9NRY2 104 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 DEPPQ9NTK1 212 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM38BQ9NVV0 291 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 MRPL22Q9NWU5 206 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 B9D1Q9UPM9 204 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CACNA1GO43497 2377 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 NSG1A0A0A6YYJ2 146 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 A0A0A6YYJ9 748 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CENPVL1A0A0U1RR11 272 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 A4D1N5 150 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 OR4C45A6NMZ5 311 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF99A8MXY4 864 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 FCMRO60667 390 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SPI1P17947 270 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 DPP4P27487 766 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 RPL10P27635 214 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ENTPD1P49961 510 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 UCP3P55916 312 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 RND3P61587 244 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF91Q05481 1191 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PLCXD2Q0VAA5 305 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 NDUFAF6Q330K2 333 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CCBE1Q6UXH8 406 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 GALNT10Q86SR1 603 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 VRK2Q86Y07 508 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CBR4Q8N4T8 237 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 OR9K2Q8NGE7 335 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 METTL21AQ8WXB1 218 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PP6455Q8WZ26 134 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 THUMPD3Q9BV44 507 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PTRH2Q9Y3E5 179 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 J3KTA2 159 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PIAS1O75925 651 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SLC25A6P12236 298 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 GABRA3P34903 492 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 DYRK1AQ13627 763 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 HABP2Q14520 560 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TSC22D1Q15714 1073 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 COL28A1Q2UY09 1125 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PDZK1Q5T2W1 519 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 C9orf139Q6ZV77 190 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 USP43Q70EL4 1123 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 WFDC3Q8IUB2 231 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF679Q8IYX0 411 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CYB561A3Q8NBI2 242 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 FAM83FQ8NEG4 500 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 OR4C3Q8NH37 302 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TSLPQ969D9 159 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TEAD3Q99594 435 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CITED2Q99967 270 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PTGES2Q9H7Z7 377 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 GALNT9Q9HCQ5 603 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TRIM36Q9NQ86 728 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SLC2A9Q9NRM0 540 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PTTG3PQ9NZH4 202 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 GMPR2Q9P2T1 348 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TEKT2Q9UIF3 430 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CIB4A0PJX0 185 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 NUDT19A8MXV4 375 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 MSTNO14793 375 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 HMGB3O15347 200 aaKnown RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 TXNL1O43396 289 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OIP5O43482 229 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SLC28A2O43868 658 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 GMNNO75496 209 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 KHDRBS3O75525 346 aaKnown RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 F8A1P23610 371 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 LAP3P28838 519 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 AGTR1P30556 359 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 CA7P43166 264 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 CD69Q07108 199 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 ITGADQ13349 1161 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SURF2Q15527 256 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 AANATQ16613 207 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SP5Q6BEB4 398 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-212ENST00000549162 PLEKHG7Q6ZR37 379 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 ZBTB49Q6ZSB9 765 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 OR1K1Q8NGR3 316 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SPSB1Q96BD6 273 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 SSX3Q99909 188 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 CABLES2Q9BTV7 478 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 FAM234AQ9H0X4 552 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 PLEKHA2Q9HB19 425 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 WDR91A4D1P6 747 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 A8MUI8 341 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM14DPA8MWL7 114 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 BOLA2-SMG1P6H3BVE0 249 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 XRCC2O43543 280 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 LY86O95711 162 aa4.26□□□□□ -1.73
SCAF11-212ENST00000549162 C1QCP02747 245 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms