RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ERICH5Q6P6B1 374 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 DOK3Q7L591 496 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 ZNF283Q8N7M2 679 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 NPEPL1Q8NDH3 523 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 DEFB108BQ8NET1 73 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 C4orf45Q96LM5 186 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 SAMD8Q96LT4 415 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 GPA33Q99795 319 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 ZNF696Q9H7X3 374 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 MAN2C1Q9NTJ4 1040 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 UBAP1Q9NZ09 502 aa10.86□□□□□ -0.67
PTCH1-218ENST00000548945 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
PTCH1-218ENST00000548945 NDRG4Q9ULP0 352 aaKnown RBP10.86□□□□□ -0.67
PTCH1-218ENST00000548945 C12orf71A8MTZ7 269 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 A8MXK9 166 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 SLC22A2O15244 555 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 TIMM8AO60220 97 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-218ENST00000548945 NGFP01138 241 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 TNFRSF1AP19438 455 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 GSTM3P21266 225 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 MSR1P21757 451 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 TNFSF4P23510 183 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 CPT2P23786 658 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 PRTN3P24158 256 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 IFNA8P32881 189 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 TNFAIP6P98066 277 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-218ENST00000548945 ST3GAL3Q11203 375 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 PSG7Q13046 419 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 ZNF774Q6NX45 483 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 KLHL36Q8N4N3 616 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 GEMIN6Q8WXD5 167 aaKnown RBP10.85□□□□□ -0.67
PTCH1-218ENST00000548945 LRRC58Q96CX6 371 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 BPIFA2Q96DR5 249 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 ECSITQ9BQ95 431 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 PATZ1Q9HBE1 687 aaKnown RBP10.85□□□□□ -0.67
PTCH1-218ENST00000548945 MSL2Q9HCI7 577 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 SAR1AQ9NR31 198 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 TMEM106BQ9NUM4 274 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 TBCCD1Q9NVR7 557 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 PLEK2Q9NYT0 353 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 NUP50Q9UKX7 468 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
PTCH1-218ENST00000548945 IFNL4K9M1U5 179 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 FXYD1O00168 92 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 FBP2O00757 339 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 SURF4O15260 269 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 TMPRSS2O15393 492 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 ABHD16AO95870 558 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 SBK2P0C263 348 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 ZNF12P17014 697 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 TNFRSF1BP20333 461 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 KITLGP21583 273 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 SLC6A9P48067 706 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 ZNF154Q13106 437 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 TOP3AQ13472 1001 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-218ENST00000548945 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
PTCH1-218ENST00000548945 KRT72Q14CN4 511 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 RABL3Q5HYI8 236 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 LRRC28Q86X40 367 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-218ENST00000548945 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 FAM156AQ8NDB6 213 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 PRRC1Q96M27 445 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 COG8Q96MW5 612 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 IL19Q9UHD0 177 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 PCDHGB1Q9Y5G3 927 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
PTCH1-218ENST00000548945 F5H0A9 414 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-218ENST00000548945 CLDN34H7C241 214 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 AHCYL1O43865 530 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 ATP5HO75947 161 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 PPIAL4GP0DN37 164 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 IFI30P13284 250 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 OR1E2P47887 323 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 SLC9A3P48764 834 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 CTXN1P60606 82 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 BTG1P62324 171 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 CYBRD1Q53TN4 286 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 LRRC75AQ8NAA5 344 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 ZNF583Q96ND8 569 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 MRI1Q9BV20 369 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 POLE4Q9NR33 117 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 MMP26Q9NRE1 261 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 ARMCX1Q9P291 453 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 EGFL7Q9UHF1 273 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 A4GNTQ9UNA3 340 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 INSIG2Q9Y5U4 225 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 CAPN7Q9Y6W3 813 aa10.83□□□□□ -0.68
PTCH1-218ENST00000548945 WNK1Q9H4A3 2382 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 BBIP1A8MTZ0 92 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 TRAPPC2LH3BP13 241 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 J3QW42 95 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 PIP5K1CO60331 668 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 KDELR2P33947 212 aa10.82□□□□□ -0.68
PTCH1-218ENST00000548945 MDH2P40926 338 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms