RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 F8W036 122 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 LINC01387J3KSC0 135 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 DOK2O60496 412 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 CENPAP49450 140 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 SKP1P63208 163 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 BLOC1S1P78537 153 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF776Q68DI1 518 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 LYG2Q86SG7 212 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 SFTPA2Q8IWL1 248 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 LIPHQ8WWY8 451 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 CCDC3Q9BQI4 270 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF629Q9UEG4 869 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 TMED7Q9Y3B3 224 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 CPED1A4D0V7 1026 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 A6NCN8 305 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 TMEM200CA6NKL6 621 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 EEF1E1-BLOC1S5C9J1V9 151 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 PNMTP11086 282 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ERV3-1Q14264 604 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ELOCQ15369 112 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 H3F3CQ6NXT2 135 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF813Q6ZN06 617 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 MDGA2Q7Z553 956 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ADGRE4PQ86SQ3 457 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 INO80EQ8NBZ0 244 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 THAP6Q8TBB0 222 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 CASTOR1Q8WTX7 329 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ASB5Q8WWX0 329 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 TLNRD1Q9H1K6 362 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 PRMT8Q9NR22 394 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 ARID1BQ8NFD5 2236 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-228ENST00000548938 MYO15AQ9UKN7 3530 aa12.35□□□□□ -0.43
HDAC7-228ENST00000548938 FANCMQ8IYD8 2048 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 FGF16O43320 207 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 GMFGO60234 142 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 APBB3O95704 486 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 RFC3P40938 356 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 NPBWR1P48145 328 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 CXADRP78310 365 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 CDNFQ49AH0 187 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 KLHL26Q53HC5 615 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 FDX2Q6P4F2 183 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SLC25A42Q86VD7 318 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 GTPBP8Q8N3Z3 284 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-228ENST00000548938 ACBD4Q8NC06 268 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 OR5AP2Q8NGF4 316 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 THRSPQ92748 146 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 NKD1Q969G9 470 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 PCOLCE2Q9UKZ9 415 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 C9orf170A2RU37 121 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 TTLL8A6PVC2 850 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SPARCP09486 303 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 PGAM2P15259 253 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 ADAM8P78325 824 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SQSTM1Q13501 440 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 EMC4Q5J8M3 183 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 DHRS7BQ6IAN0 325 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-228ENST00000548938 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SPAG16Q8N0X2 631 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 PHOSPHO1Q8TCT1 267 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 C2CD4CQ8TF44 421 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 TAAR8Q969N4 342 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 PIK3IP1Q96FE7 263 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 CKLFQ9UBR5 152 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 B9D1Q9UPM9 204 aa12.34□□□□□ -0.43
HDAC7-228ENST00000548938 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 HSPB2A8KAH6 182 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 C11orf98E9PRG8 122 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 K7EQS6 105 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 PHYHO14832 338 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 PLGP00747 810 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 SPP1P10451 314 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 VAMP1P23763 118 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 RORAP35398 523 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 LTBRP36941 435 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 KIR2DL1P43626 348 aaPredicted RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 GPR3P46089 330 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 PNLIPRP2P54317 469 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 BTG2P78543 158 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 IL13RA1P78552 427 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 SKP2Q13309 424 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 HSPB2Q16082 182 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 MICBQ29980 383 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 RNASE10Q5GAN6 216 aaKnown RBP12.33□□□□□ -0.44
HDAC7-228ENST00000548938 OR52W1Q6IF63 320 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 ZNF679Q8IYX0 411 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 GVQW1Q8N7I0 195 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 OR4A4PQ8NGN8 299 aa12.33□□□□□ -0.44
HDAC7-228ENST00000548938 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms