RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 SLC26A7Q8TE54 656 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 SSMEM1Q8WWF3 244 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 SPDL1Q96EA4 605 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 OR2V2Q96R30 315 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 OR52B2Q96RD2 323 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 SIGLEC11Q96RL6 698 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 WACQ9BTA9 647 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 MARCH7Q9H992 704 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 UGT2A1Q9Y4X1 527 aa14.17□□□□□ -0.14
VPS29-204ENST00000548259 WNK1Q9H4A3 2382 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 SLC22A31A6NKX4 558 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 OR7A10O76100 309 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 MT-ND1P03886 318 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 LAP3P28838 519 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 PAX2Q02962 417 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 MPP2Q14168 576 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 DUSP7Q16829 419 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 CYP51A1Q16850 503 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 ARMC4Q5T2S8 1044 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 HIST2H2BDQ6DRA6 164 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 ZNF774Q6NX45 483 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 BRD3OSQ6XYD6 125 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 Q6YL49 198 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 VASH1Q7L8A9 365 aaPredicted RBP14.16□□□□□ -0.14
VPS29-204ENST00000548259 SLC30A8Q8IWU4 369 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 MSRB3Q8IXL7 192 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 POU5F2Q8N7G0 328 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 AENQ8WTP8 325 aaKnown RBP14.16□□□□□ -0.14
VPS29-204ENST00000548259 RASSF5Q8WWW0 418 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 DYRK2Q92630 601 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 SGTBQ96EQ0 304 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 NUDT16L1Q9BRJ7 211 aaKnown RBP14.16□□□□□ -0.14
VPS29-204ENST00000548259 ZNF426Q9BUY5 554 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 ALG12Q9BV10 488 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 CHIAQ9BZP6 476 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 TCF7L1Q9HCS4 588 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 VAPAQ9P0L0 249 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 CLN8Q9UBY8 286 aa14.16□□□□□ -0.14
VPS29-204ENST00000548259 M0QX08 132 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 COX5BP10606 129 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 SELEP16581 610 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 AQP2P41181 271 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 RBM34P42696 430 aaKnown RBP14.15□□□□□ -0.14
VPS29-204ENST00000548259 PITPNBP48739 271 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 SRP9P49458 86 aaKnown RBP14.15□□□□□ -0.14
VPS29-204ENST00000548259 MMP16P51512 607 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 GUCY1A3Q02108 690 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 ASPHD2Q6ICH7 369 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 BLOC1S3Q6QNY0 202 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 RHOUQ7L0Q8 258 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 PATL1Q86TB9 770 aaKnown RBP14.15□□□□□ -0.14
VPS29-204ENST00000548259 C10orf111Q8N326 155 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 CMBLQ96DG6 245 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 PCDHAC1Q9H158 963 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 TXNIPQ9H3M7 391 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 GCM1Q9NP62 436 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 SLAMF8Q9P0V8 285 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 ASH2LQ9UBL3 628 aa14.15□□□□□ -0.14
VPS29-204ENST00000548259 SOX21Q9Y651 276 aaPredicted RBP14.15□□□□□ -0.14
VPS29-204ENST00000548259 POLR3GO15318 223 aaPredicted RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 ENSAO43768 121 aaKnown RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 FSTL3O95633 263 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 IGF2P01344 180 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 OPN1SWP03999 348 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 IRF2P14316 349 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 MSR1P21757 451 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 MRPL19P49406 292 aaKnown RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 PCBP3P57721 371 aaKnown RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 FMODQ06828 376 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 SCRN3Q0VDG4 424 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 C2orf68Q2NKX9 166 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 INTS11Q5TA45 600 aaKnown RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 SLC25A47Q6Q0C1 308 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 HDAC2Q92769 488 aaKnown RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 PTP4A1Q93096 173 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 HAVCR1Q96D42 359 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 TMEM165Q9HC07 324 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 MEPEQ9NQ76 525 aaPredicted RBP14.14□□□□□ -0.15
VPS29-204ENST00000548259 CCDC167Q9P0B6 97 aa14.14□□□□□ -0.15
VPS29-204ENST00000548259 A0A1W2PPL8 197 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 P2RY10O00398 339 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 PHYHO14832 338 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 LYPD3O95274 346 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 THY1P04216 161 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 HTR5AP47898 357 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 FGF12P61328 243 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 RELBQ01201 579 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 CD276Q5ZPR3 534 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 Q6ZR03 302 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 C1QL4Q86Z23 238 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 MREGQ8N565 214 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 GPR32P1Q8NGA4 272 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 OR13G1Q8NGZ3 307 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 GATAD2BQ8WXI9 593 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 NMD3Q96D46 503 aaKnown RBP14.13□□□□□ -0.15
VPS29-204ENST00000548259 TRIM15Q9C019 465 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 TANC2Q9HCD6 1990 aa14.13□□□□□ -0.15
VPS29-204ENST00000548259 J3QW42 95 aa14.12□□□□□ -0.15
VPS29-204ENST00000548259 CLPXO76031 633 aa14.12□□□□□ -0.15
VPS29-204ENST00000548259 LIPFP07098 398 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms