RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 STK17BO94768 372 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 PNPP00491 289 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ACRP10323 421 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 NFYBP25208 207 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ITGB8P26012 769 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ARRB1P49407 418 aaPredicted RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 CCINQ13939 588 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 OR10K2Q6IF99 312 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 CORO6Q6QEF8 472 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 TRAPPC6BQ86SZ2 158 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ZNF679Q8IYX0 411 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 JAGN1Q8N5M9 183 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 BCORP1Q8N888 145 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ACBD4Q8NC06 268 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 NANPQ8TBE9 248 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ASB17Q8WXJ9 295 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 NKD1Q969G9 470 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 SCARF2Q96GP6 870 aaPredicted RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 SLC25A44Q96H78 314 aaPredicted RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 PRMT8Q9NR22 394 aaPredicted RBP12.79□□□□□ -0.36
SRP54-202ENST00000546080 STARD5Q9NSY2 213 aa12.79□□□□□ -0.36
SRP54-202ENST00000546080 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
SRP54-202ENST00000546080 SLC31A1O15431 190 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 CSF2RAP15509 400 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 AKR1C4P17516 323 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 ACTR1BP42025 376 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 RAB5BP61020 215 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 ACTR1AP61163 376 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 PNLIPRP3Q17RR3 467 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 PHF19Q5T6S3 580 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
SRP54-202ENST00000546080 FJX1Q86VR8 437 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 ZSCAN1Q8NBB4 408 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 OR10R2Q8NGX6 335 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 CCL4L1Q8NHW4 92 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 ELP5Q8TE02 316 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 CPNE2Q96FN4 548 aaPredicted RBP12.78□□□□□ -0.36
SRP54-202ENST00000546080 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 ELF4Q99607 663 aaPredicted RBP12.78□□□□□ -0.36
SRP54-202ENST00000546080 NUDT9Q9BW91 350 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 SLC22A11Q9NSA0 550 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 GDE1Q9NZC3 331 aa12.78□□□□□ -0.36
SRP54-202ENST00000546080 LAMA2P24043 3122 aaKnown RBP12.77□□□□□ -0.36
SRP54-202ENST00000546080 SGCEO43556 437 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 OR6A2O95222 327 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 ERCC1P07992 297 aaPredicted RBP12.77□□□□□ -0.36
SRP54-202ENST00000546080 ACAA1P09110 424 aaPredicted RBP12.77□□□□□ -0.36
SRP54-202ENST00000546080 SPARCP09486 303 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 CT45A8P0DMV1 189 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 CT45A9P0DMV2 189 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 IGFBP3P17936 291 aaPredicted RBP12.77□□□□□ -0.36
SRP54-202ENST00000546080 FSTP19883 344 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 SERPINF1P36955 418 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 DNASE1L1P49184 302 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 EGR4Q05215 589 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 MFGE8Q08431 387 aaPredicted RBP12.77□□□□□ -0.36
SRP54-202ENST00000546080 PEA15Q15121 130 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 KLHL26Q53HC5 615 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 C2orf27AQ580R0 203 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 CT45A2Q5DJT8 189 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 FAM78AQ5JUQ0 283 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 TEX30Q5JUR7 227 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 SLC18B1Q6NT16 456 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 PAQR4Q8N4S7 273 aaPredicted RBP12.77□□□□□ -0.36
SRP54-202ENST00000546080 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 OR51A2Q8NGJ7 313 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 OR1E3Q8WZA6 343 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 TOX2Q96NM4 488 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.36
SRP54-202ENST00000546080 XKRYO14609 159 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 LDLRAD4O15165 306 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 NUDT21O43809 227 aaKnown RBP12.77□□□□□ -0.37
SRP54-202ENST00000546080 KAT7O95251 611 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 DUS4LO95620 317 aaKnown RBP12.77□□□□□ -0.37
SRP54-202ENST00000546080 MPZP25189 248 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 PTGFRP43088 359 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 SPOCK1Q08629 439 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 SRSF5Q13243 272 aaKnown RBP12.77□□□□□ -0.37
SRP54-202ENST00000546080 ADAD2Q8NCV1 583 aaKnown RBP12.77□□□□□ -0.37
SRP54-202ENST00000546080 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
SRP54-202ENST00000546080 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.37
SRP54-202ENST00000546080 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
SRP54-202ENST00000546080 MEGF11A6BM72 1044 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 LINC00587B1AMM8 73 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 OR2T1O43869 369 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 SMIM6P0DI80 62 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 HPGDP15428 266 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 LSSP48449 732 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 RIDAP52758 137 aaKnown RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 FAM109BQ6ICB4 259 aaPredicted RBP12.76□□□□□ -0.37
SRP54-202ENST00000546080 OR52W1Q6IF63 320 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 GVQW1Q8N7I0 195 aa12.76□□□□□ -0.37
SRP54-202ENST00000546080 OR13C3Q8NGS6 347 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms