RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 LRRC36Q1X8D7 754 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 HIST2H3PS2Q5TEC6 136 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 HIST2H3AQ71DI3 136 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 ALDH16A1Q8IZ83 802 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 TCEANCQ8N8B7 351 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 ZNF511Q8NB15 262 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 TMEM163Q8TC26 289 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 HRASLS5Q96KN8 279 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 CISD1Q9NZ45 108 aaKnown RBP17.73■□□□□ 0.43
HMGA2-211ENST00000545998 CYB5R1Q9UHQ9 305 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 KCNG2Q9UJ96 466 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 POU2F3Q9UKI9 436 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 ATP23Q9Y6H3 246 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 COMMD3-BMI1R4GMX3 469 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 MAST4O15021 2626 aa17.73■□□□□ 0.43
HMGA2-211ENST00000545998 DLGAP1O14490 977 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 RER1O15258 196 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 SGCEO43556 437 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 CCL2P13500 99 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 ZNF823P16415 610 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 STOMP27105 288 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 TBC1D28Q2M2D7 210 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 CCDC92Q53HC0 331 aaPredicted RBP17.72■□□□□ 0.43
HMGA2-211ENST00000545998 OGFRL1Q5TC84 451 aaPredicted RBP17.72■□□□□ 0.43
HMGA2-211ENST00000545998 SLC18B1Q6NT16 456 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 CORO6Q6QEF8 472 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 VASH1Q7L8A9 365 aaPredicted RBP17.72■□□□□ 0.43
HMGA2-211ENST00000545998 ZNF611Q8N823 705 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 GJC3Q8NFK1 279 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 OR4F15Q8NGB8 312 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 FBXW5Q969U6 566 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 WDR76Q9H967 626 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 MARCH7Q9H992 704 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 C8orf4Q9NR00 106 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 CCDC168Q8NDH2 2452 aa17.72■□□□□ 0.43
HMGA2-211ENST00000545998 LOC100509620A0A075B734 347 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 H0YHG0 523 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 DOK2O60496 412 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 PSKH1P11801 424 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 APLNRP35414 380 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 ADAM8P78325 824 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 PCK2Q16822 640 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 KLHL12Q53G59 568 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 SLC35D3Q5M8T2 416 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 PAMR1Q6UXH9 720 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 C20orf204Q6ZNR8 217 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 LINC00346Q8IVM7 164 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 GALNT4Q8N4A0 578 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 PAQR4Q8N4S7 273 aaPredicted RBP17.71■□□□□ 0.43
HMGA2-211ENST00000545998 PACRGLQ8N7B6 248 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 NUP37Q8NFH4 326 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 OR1J2Q8NGS2 313 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 POM121L2Q96KW2 1035 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 RDH12Q96NR8 316 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 CDADC1Q9BWV3 514 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 RNPEPL1Q9HAU8 725 aa17.71■□□□□ 0.43
HMGA2-211ENST00000545998 COX5BP10606 129 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 GSTT1P30711 240 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 ENTPD1P49961 510 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 CDC42P60953 191 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 SLC34A1Q06495 639 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 TEX30Q5JUR7 227 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 AADACL4Q5VUY2 407 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 BCDIN3DQ7Z5W3 292 aaKnown RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 ZMYND19Q96E35 227 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 IL4I1Q96RQ9 567 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 SMPD3Q9NY59 655 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 PLEK2Q9NYT0 353 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 ST6GALNAC2Q9UJ37 374 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 GDF2Q9UK05 429 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 NDRG4Q9ULP0 352 aaKnown RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 CCDC182A6NF36 153 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 OR6C6A6NF89 314 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 SYNGR3O43761 229 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 NR4A1P22736 598 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 RPS27P42677 84 aaKnown RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 NKX6-1P78426 367 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 APOFQ13790 326 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 CFAP77Q6ZQR2 320 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 TIGD4Q8IY51 512 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 OR8J1Q8NGP2 316 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 FAM81AQ8TBF8 368 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 SMAP2Q8WU79 429 aaPredicted RBP17.7■□□□□ 0.42
HMGA2-211ENST00000545998 PITX2Q99697 317 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 DHRS9Q9BPW9 319 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 CDH20Q9HBT6 801 aa17.7■□□□□ 0.42
HMGA2-211ENST00000545998 C5orf49A4QMS7 147 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 ZNF593O00488 134 aaPredicted RBP17.69■□□□□ 0.42
HMGA2-211ENST00000545998 DANCRP0C864 163 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 HTR5AP47898 357 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 GDI2P50395 445 aaKnown RBP17.69■□□□□ 0.42
HMGA2-211ENST00000545998 RAB35Q15286 201 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 NXNL2Q5VZ03 156 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 KRT80Q6KB66 452 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 ERI1Q8IV48 349 aaKnown RBP17.69■□□□□ 0.42
HMGA2-211ENST00000545998 OR2AJ1Q8NGZ0 328 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 OR1F12Q8NHA8 337 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 INTS14Q96SY0 518 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 TEAD3Q99594 435 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 CA10Q9NS85 328 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms