RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ROM1Q03395 351 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 ELOCQ15369 112 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 BEX5Q5H9J7 111 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 FAM74A1Q5RGS3 127 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 LIN54Q6MZP7 749 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 C12orf45Q8N5I9 185 aaPredicted RBP14.17□□□□□ -0.14
LDLR-204ENST00000545707 OR1S1Q8NH92 325 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 THAP3Q8WTV1 239 aaPredicted RBP14.17□□□□□ -0.14
LDLR-204ENST00000545707 PMEPA1Q969W9 287 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 SEC22AQ96IW7 307 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 WWTR1Q9GZV5 400 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 DUSP15Q9H1R2 295 aaPredicted RBP14.17□□□□□ -0.14
LDLR-204ENST00000545707 C8orf33Q9H7E9 229 aaPredicted RBP14.17□□□□□ -0.14
LDLR-204ENST00000545707 C12orf10Q9HB07 376 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 GPR160Q9UJ42 338 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 MSRAQ9UJ68 235 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 WDFY3Q8IZQ1 3526 aa14.17□□□□□ -0.14
LDLR-204ENST00000545707 NPIPB7O75200 414 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 DXOO77932 396 aaKnown RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 TPPPO94811 219 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 CD2P06729 351 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 TAS2R19P59542 299 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 SLC22A6Q4U2R8 563 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 DCXRQ7Z4W1 244 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 STEAP2Q8NFT2 490 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 OR4D6Q8NGJ1 314 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 SLC6A7Q99884 636 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 PPA2Q9H2U2 334 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 CENPMQ9NSP4 180 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 VSX1Q9NZR4 365 aaPredicted RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 PFDN2Q9UHV9 154 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 KLK13Q9UKR3 277 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 ATXN7L1Q9ULK2 861 aaPredicted RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 LOC107986453A0A1B0GWG9 222 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 P2RY10O00398 339 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 IGFBP3P17936 291 aaPredicted RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 EIF1AXP47813 144 aaKnown RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 POLR2HP52434 150 aaKnown RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 OR1D5P58170 312 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 ACTBP60709 375 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 GMFBP60983 142 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 ACTG1P63261 375 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 TAGLNQ01995 201 aaKnown RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 PMPCAQ10713 525 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 ELAVL1Q15717 326 aaKnown RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 ATPAF1Q5TC12 328 aaPredicted RBP14.16□□□□□ -0.14
LDLR-204ENST00000545707 RTN4RL2Q86UN3 420 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 OR52N5Q8NH56 324 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 OR1L3Q8NH93 324 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 FAM46BQ96A09 425 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 ARL5BQ96KC2 179 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 MKL2Q9ULH7 1088 aa14.16□□□□□ -0.14
LDLR-204ENST00000545707 KIF26BQ2KJY2 2108 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 WIPF3A6NGB9 483 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 A8MVM7 634 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 C2CD4DB7Z1M9 353 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 H3BMH7 237 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 ZNF735P0CB33 412 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 ATXN7L3Q14CW9 347 aaPredicted RBP14.15□□□□□ -0.14
LDLR-204ENST00000545707 ZMYND11Q15326 602 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 NUP54Q7Z3B4 507 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 ZNF546Q86UE3 836 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 BPIFB2Q8N4F0 458 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 GVQW1Q8N7I0 195 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 ZNF454Q8N9F8 522 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 WDR13Q9H1Z4 485 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 MED29Q9NX70 200 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 MMACHCQ9Y4U1 282 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 HSPB2A8KAH6 182 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 ZNF736B4DX44 427 aaPredicted RBP14.15□□□□□ -0.14
LDLR-204ENST00000545707 SHISA8B8ZZ34 492 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 CYB5AP00167 134 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 MT-ATP6P00846 226 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 CFPP27918 469 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 MPGP29372 298 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 GLO1Q04760 184 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 SMAD2Q15796 467 aaKnown RBP14.15□□□□□ -0.14
LDLR-204ENST00000545707 HSPB2Q16082 182 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 CDH26Q8IXH8 852 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 ST8SIA4Q92187 359 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 POTEKPQ9BYX7 375 aa14.15□□□□□ -0.14
LDLR-204ENST00000545707 TMEM269A0A1B0GVZ9 245 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 LILRA5A6NI73 299 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 A8MXK9 166 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 EIF4E2O60573 245 aaKnown RBP14.14□□□□□ -0.15
LDLR-204ENST00000545707 ARRB1P49407 418 aaPredicted RBP14.14□□□□□ -0.15
LDLR-204ENST00000545707 DHRS2Q13268 280 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 OR52W1Q6IF63 320 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 GKN2Q86XP6 184 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 PDZD9Q8IXQ8 264 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 BEST3Q8N1M1 668 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 TMEM229BQ8NBD8 167 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 OR5M9Q8NGP3 310 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 OR13C8Q8NGS7 320 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 CYYR1Q96J86 154 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 SHARPINQ9H0F6 387 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 C1orf198Q9H425 327 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 G6PC2Q9NQR9 355 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 SLC17A5Q9NRA2 495 aa14.14□□□□□ -0.15
LDLR-204ENST00000545707 OR52A1Q9UKL2 312 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms