RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TMEM82A0PJX8 343 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 SLC22A23A1A5C7 686 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 RHPN2P1A8MT19 583 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 VAMP1P23763 118 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 RIDAP52758 137 aaKnown RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 POU3F1Q03052 451 aaPredicted RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 MAMDC2Q7Z304 686 aaPredicted RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 PRSS42Q7Z5A4 293 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 COMMD2Q86X83 199 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 SPERTQ8NA61 448 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 ETV7Q9Y603 341 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 TRAV36DV7A0A075B6V5 113 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 LOC107986453A0A1B0GWG9 222 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 GABRA1P14867 456 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 CPN1P15169 458 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 PI3P19957 117 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 PRKXP51817 358 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 ZNF660Q6AZW8 331 aaPredicted RBP13.48□□□□□ -0.25
USP28-214ENST00000545540 RGS7BPQ6MZT1 257 aaPredicted RBP13.48□□□□□ -0.25
USP28-214ENST00000545540 ZNF546Q86UE3 836 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 ZNF440Q8IYI8 595 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 BPIFB2Q8N4F0 458 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 ZNF454Q8N9F8 522 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 STEAP2Q8NFT2 490 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 OR2I1PQ8NGU4 316 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 FBRSQ9HAH7 460 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 KLK13Q9UKR3 277 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 SLC5A6Q9Y289 635 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 SLC17A2O00624 439 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 PLATP00750 562 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 CD1AP06126 327 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 AKR1C4P17516 323 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 SLC46A1Q96NT5 459 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 SEC61A2Q9H9S3 476 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 EXOSC3Q9NQT5 275 aaKnown RBP13.48□□□□□ -0.25
USP28-214ENST00000545540 NUP50Q9UKX7 468 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 CA14Q9ULX7 337 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 TMEM14AQ9Y6G1 99 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 EEF1E1-BLOC1S5C9J1V9 151 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 HOXD4P09016 255 aaPredicted RBP13.48□□□□□ -0.25
USP28-214ENST00000545540 CSF1P09603 554 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 GNB3P16520 340 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 CDAP32320 146 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 BLKP51451 505 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 CXADRP78310 365 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 CFHR1Q03591 330 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 EGR3Q06889 387 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 UNQ6126/PRO20091Q6UXV3 157 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 BEST3Q8N1M1 668 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 OR6N1Q8NGY5 312 aa13.48□□□□□ -0.25
USP28-214ENST00000545540 IGLV1-36A0A0B4J1U3 117 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 WIPF3A6NGB9 483 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 CYB5AP00167 134 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 IGKV3-11P04433 115 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 SERTAD2Q14140 314 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 ISXQ2M1V0 245 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 GPAT4Q86UL3 456 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 SLC26A10Q8NG04 563 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 OR52N4Q8NGI2 321 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 ST8SIA4Q92187 359 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 C8orf44Q96CB5 159 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 SLC41A2Q96JW4 573 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 C5orf34Q96MH7 638 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 VN1R1Q9GZP7 353 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 CKLFQ9UBR5 152 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 SUSD2Q9UGT4 822 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 PRELID1Q9Y255 219 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 TRAV14DV4A0A0A6YYC5 116 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 C13orf42A0A1B0GVH6 325 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 A0A1W2PP11 408 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 A0A1W2PPC1 479 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 HLA-AP01891 365 aaKnown RBP13.47□□□□□ -0.25
USP28-214ENST00000545540 LUMP51884 338 aaPredicted RBP13.47□□□□□ -0.25
USP28-214ENST00000545540 PMPCAQ10713 525 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 LY6G6FQ5SQ64 297 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 NPRL2Q8WTW4 380 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 WWTR1Q9GZV5 400 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 LAT2Q9GZY6 243 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 C12orf4Q9NQ89 552 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 EPHA6Q9UF33 1036 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
USP28-214ENST00000545540 MFSD2BA6NFX1 497 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 METTL12A8MUP2 240 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 ZNF736B4DX44 427 aaPredicted RBP13.46□□□□□ -0.25
USP28-214ENST00000545540 ZNF823P16415 610 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 KLK2P20151 261 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 IGFBP4P22692 258 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.25
USP28-214ENST00000545540 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.25
USP28-214ENST00000545540 SLC43A2Q8N370 569 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 C12orf45Q8N5I9 185 aaPredicted RBP13.46□□□□□ -0.25
USP28-214ENST00000545540 CMTM3Q96MX0 182 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 CDCA3Q99618 268 aaPredicted RBP13.46□□□□□ -0.25
USP28-214ENST00000545540 TXNDC12O95881 172 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 IL5P05113 134 aa13.46□□□□□ -0.25
USP28-214ENST00000545540 CD2P06729 351 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms