RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FGF12P61328 243 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 RPL18Q07020 188 aaKnown RBP12.25□□□□□ -0.45
RTN3-214ENST00000545432 DUSP7Q16829 419 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 TNFAIP8L3Q5GJ75 292 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 ENTPD8Q5MY95 495 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 CEP85LQ5SZL2 805 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 SLC27A4Q6P1M0 643 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 SLC2A7Q6PXP3 512 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 ARL9Q6T311 187 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 HIST3H2AQ7L7L0 130 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 LDLRAD3Q86YD5 345 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 ARMC8Q8IUR7 673 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 GPR32P1Q8NGA4 272 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 HIST1H2ACQ93077 130 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 OR2V2Q96R30 315 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 POFUT1Q9H488 388 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 TCF7L1Q9HCS4 588 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
RTN3-214ENST00000545432 A0A1B0GWJ7 208 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 A0A1W2PRG6 482 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 H0YL77 283 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 P2RY10O00398 339 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 GPR137BO60478 399 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 F13BP05160 661 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 RPS2P15880 293 aaKnown RBP12.24□□□□□ -0.45
RTN3-214ENST00000545432 GSTM3P21266 225 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 PPIBP23284 216 aaKnown RBP12.24□□□□□ -0.45
RTN3-214ENST00000545432 SLC6A2P23975 617 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 DAP3P51398 398 aaKnown RBP12.24□□□□□ -0.45
RTN3-214ENST00000545432 ERVK-25P63136 954 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 IFFO1Q0D2I5 559 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 SCARB2Q14108 478 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
RTN3-214ENST00000545432 SGCAQ16586 387 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 WDR25Q64LD2 544 aaPredicted RBP12.24□□□□□ -0.45
RTN3-214ENST00000545432 REC114Q7Z4M0 266 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 OR4D11Q8NGI4 311 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 TBC1D15Q8TC07 691 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 DNAH3Q8TD57 4116 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 ADAMTS16Q8TE57 1224 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 HDAC2Q92769 488 aaKnown RBP12.24□□□□□ -0.45
RTN3-214ENST00000545432 CMBLQ96DG6 245 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 MAGEB18Q96M61 343 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
RTN3-214ENST00000545432 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 TRAPPC13A5PLN9 417 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 GMNCA6NCL1 334 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 G3V4G9 280 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 BLOC1S5-TXNDC5H3BN57 136 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 M0R3H8 397 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 PHYHO14832 338 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 UBDO15205 165 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 TSPAN9O75954 239 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 LAP3P28838 519 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 PSMB10P40306 273 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 IER3P46695 156 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 PCBD1P61457 104 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 TAF11Q15544 211 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 Q6ZSV7 163 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 MAVSQ7Z434 540 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 NANOGNBQ7Z5D8 188 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 PTOV1Q86YD1 416 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 FUNDC1Q8IVP5 155 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 FAM110DQ8TAY7 271 aaPredicted RBP12.23□□□□□ -0.45
RTN3-214ENST00000545432 PTP4A1Q93096 173 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 TBX15Q96SF7 602 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 INIPQ9NRY2 104 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 TNFRSF19Q9NS68 423 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 THAP1Q9NVV9 213 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 VAPAQ9P0L0 249 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 SLC13A4Q9UKG4 626 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 NDRG4Q9ULP0 352 aaKnown RBP12.23□□□□□ -0.45
RTN3-214ENST00000545432 STARD10Q9Y365 291 aa12.23□□□□□ -0.45
RTN3-214ENST00000545432 C22orf46C9J442 243 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 MCIDASD6RGH6 385 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 PIN1P1O15428 100 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 MT-ND1P03886 318 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 OPN1MWP04001 364 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 LIPFP07098 398 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 OPN1MW2P0DN77 364 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 OPN1MW3P0DN78 364 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 NR2C1P13056 603 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 RAC2P15153 192 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 FUT1P19526 365 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 CFHR2P36980 270 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 PMELP40967 661 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 PITPNBP48739 271 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 FMODQ06828 376 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 RUSC1-AS1Q66K80 236 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 NXNQ6DKJ4 435 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 RBM45Q8IUH3 476 aaKnown RBP12.22□□□□□ -0.45
RTN3-214ENST00000545432 SMYD1Q8NB12 490 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 OR8B3Q8NGG8 313 aa12.22□□□□□ -0.45
RTN3-214ENST00000545432 FNDC8Q8TC99 324 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms