RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SLC35F1Q5T1Q4 408 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 OR6V1Q8N148 313 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF540Q8NDQ6 660 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 OR10G2Q8NGC3 310 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 OR52E2Q8NGJ4 325 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 ABHD4Q8TB40 342 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 SNX33Q8WV41 574 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 TSSK2Q96PF2 358 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 DGCR6LQ9BY27 220 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 RACGAP1Q9H0H5 632 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 ELOVL3Q9HB03 270 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 RPRD1BQ9NQG5 326 aaKnown RBP13.5□□□□□ -0.25
CCDC78-216ENST00000544996 VNN3Q9NY84 501 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 PLEK2Q9NYT0 353 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 TAAR3PQ9P1P4 343 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 ASH2LQ9UBL3 628 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 POMPQ9Y244 141 aa13.5□□□□□ -0.25
CCDC78-216ENST00000544996 IGLV3-9A0A075B6K5 115 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 DCTN6O00399 190 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 E2F6O75461 281 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 MT-ND5P03915 603 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 WNT5AP41221 380 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 HTR5AP47898 357 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 ERVS71-1P61550 626 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.49□□□□□ -0.25
CCDC78-216ENST00000544996 LOXL1Q08397 574 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-216ENST00000544996 COX10Q12887 443 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 MAD2L1BPQ15013 274 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF718Q3SXZ3 478 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.49□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF101Q8IZC7 436 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 SDR9C7Q8NEX9 313 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 UBASH3BQ8TF42 649 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 GIPC3Q8TF64 312 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 TSSK6Q9BXA6 273 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 MYEF2Q9P2K5 600 aaKnown RBP13.49□□□□□ -0.25
CCDC78-216ENST00000544996 BAIAP2Q9UQB8 552 aa13.49□□□□□ -0.25
CCDC78-216ENST00000544996 IGLV1-36A0A0B4J1U3 117 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 OR6C68A6NDL8 312 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 ARRDC5A6NEK1 342 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 BHLHE40O14503 412 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 ICMTO60725 284 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 ABHD16AO95870 558 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 CLPTM1O96005 669 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 HLA-DQA2P01906 255 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 NAT2P11245 290 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 USF1P22415 310 aaPredicted RBP13.48□□□□□ -0.25
CCDC78-216ENST00000544996 NR4A2P43354 598 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 PPP1CBP62140 327 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 PPP2R2BQ00005 443 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 SLC36A3Q495N2 470 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 TMEM154Q6P9G4 183 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 VASH1Q7L8A9 365 aaPredicted RBP13.48□□□□□ -0.25
CCDC78-216ENST00000544996 ZBTB46Q86UZ6 589 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 ZNF786Q8N393 782 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 GJC3Q8NFK1 279 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 OR2T33Q8NG76 320 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 FEVQ99581 238 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 CDADC1Q9BWV3 514 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 CADM1Q9BY67 442 aaKnown RBP13.48□□□□□ -0.25
CCDC78-216ENST00000544996 PLA2G12AQ9BZM1 189 aa13.48□□□□□ -0.25
CCDC78-216ENST00000544996 HINT3Q9NQE9 182 aaKnown RBP13.48□□□□□ -0.25
CCDC78-216ENST00000544996 TCRBV3S1A0A5B6 114 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 H3BSA7 217 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 GPANK1O95872 356 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 IGHV3-13P01766 116 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 IGFBP1P08833 259 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-216ENST00000544996 GAAP10253 952 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 TUBG1P23258 451 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 TEKQ02763 1124 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 MEP1BQ16820 701 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 PCGF3Q3KNV8 242 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 ALKBH6Q3KRA9 238 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 SPATA46Q5T0L3 261 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 CD300LDQ6UXZ3 194 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 LNX2Q8N448 690 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 NPEPL1Q8NDH3 523 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 SLC26A10Q8NG04 563 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 OR8D4Q8NGM9 314 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 OR2T4Q8NH00 348 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 OR1F12Q8NHA8 337 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 SLC25A40Q8TBP6 338 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 MARS2Q96GW9 593 aaKnown RBP13.47□□□□□ -0.25
CCDC78-216ENST00000544996 OR2J1Q9GZK6 312 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 MMADHCQ9H3L0 296 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-216ENST00000544996 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 KLHL21Q9UJP4 597 aa13.47□□□□□ -0.25
CCDC78-216ENST00000544996 A0A096LNT2 108 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 PLSCR5A0PG75 271 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 C17orf100A8MU93 164 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 VWC2LB2RUY7 222 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 H3BN98 237 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 RER1O15258 196 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 FKBP6O75344 327 aa13.46□□□□□ -0.25
CCDC78-216ENST00000544996 SOX14O95416 240 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms