RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NANOS3P60323 173 aaKnown RBP26.79■■□□□ 1.88
CCM2-219ENST00000544363 TRAM1Q15629 374 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 CFAP77Q6ZQR2 320 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 TEX19Q8NA77 164 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 KDF1Q8NAX2 398 aaPredicted RBP26.79■■□□□ 1.88
CCM2-219ENST00000544363 GHSRQ92847 366 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 COQ7Q99807 217 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 FOXB1Q99853 325 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 TXNL4BQ9NX01 149 aaKnown RBP26.79■■□□□ 1.88
CCM2-219ENST00000544363 CD8B2A6NJW9 211 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 TDGF1P3P51864 188 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 NSUN5P2Q63ZY6 315 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 OR7E24Q6IFN5 339 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 OR10S1Q8NGN2 331 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 HSD17B8Q92506 261 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 CENPMQ9NSP4 180 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 UPB1Q9UBR1 384 aa26.79■■□□□ 1.88
CCM2-219ENST00000544363 ZNF587BE7ETH6 402 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 GABRA1P14867 456 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 ZNF182P17025 639 aaPredicted RBP26.78■■□□□ 1.88
CCM2-219ENST00000544363 GALP22466 123 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 UGT2B10P36537 528 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 OPRL1P41146 370 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 ALKBH1Q13686 389 aaKnown RBP26.78■■□□□ 1.88
CCM2-219ENST00000544363 USP43Q70EL4 1123 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 LRRC18Q8N456 261 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 C9orf106Q8NAJ2 232 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 HDHD5Q9BXW7 423 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 DCSTAMPQ9H295 470 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 MED12LQ86YW9 2145 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 BSNQ9UPA5 3926 aa26.78■■□□□ 1.88
CCM2-219ENST00000544363 ATMQ13315 3056 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 BOD1L1Q8NFC6 3051 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 H2BFMP0C1H6 154 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 FGF9P31371 208 aaPredicted RBP26.77■■□□□ 1.88
CCM2-219ENST00000544363 GUSBP1Q15486 140 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 FDX2Q6P4F2 183 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 RHOUQ7L0Q8 258 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 MS4A15Q8N5U1 240 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 KBTBD8Q8NFY9 601 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 C12orf49Q9H741 205 aa26.77■■□□□ 1.88
CCM2-219ENST00000544363 SPENQ96T58 3664 aaKnown RBP26.76■■□□□ 1.88
CCM2-219ENST00000544363 GABRPO00591 440 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 RER1O15258 196 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 WDR1O75083 606 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 RGS9O75916 674 aaPredicted RBP26.76■■□□□ 1.87
CCM2-219ENST00000544363 TPOP07202 933 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 GTF3C1Q12789 2109 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 OR2A2Q6IF42 318 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 HIST2H2ABQ8IUE6 130 aaPredicted RBP26.76■■□□□ 1.87
CCM2-219ENST00000544363 OR2G2Q8NGZ5 317 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 DCLRE1CQ96SD1 692 aaKnown RBP26.76■■□□□ 1.87
CCM2-219ENST00000544363 FRRS1LQ9P0K9 344 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 GPRIN2O60269 458 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 CST2P09228 141 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 B4GALT1P15291 398 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 PTGER4P35408 488 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 OR3A2P47893 321 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 NRN1LQ496H8 165 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 C22orf42Q6IC83 251 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 TMEM91Q6ZNR0 172 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 FAM214BQ7L5A3 538 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 GCNT2Q8N0V5 402 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 UBE2J2Q8N2K1 259 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 GJC3Q8NFK1 279 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 FAM57AQ8TBR7 257 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 SNRNP40Q96DI7 357 aaKnown RBP26.76■■□□□ 1.87
CCM2-219ENST00000544363 PDCD1LG2Q9BQ51 273 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 SLX1AQ9BQ83 275 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 GSTK1Q9Y2Q3 226 aa26.76■■□□□ 1.87
CCM2-219ENST00000544363 ZNF878C9JN71 531 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 HIST1H3AP68431 136 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 HIST2H3PS2Q5TEC6 136 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 HIST2H3AQ71DI3 136 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 SLC22A24Q8N4F4 322 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 ABHD4Q8TB40 342 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 DYNC2LI1Q8TCX1 351 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 PNRC2Q9NPJ4 139 aaKnown RBP26.75■■□□□ 1.87
CCM2-219ENST00000544363 PRSS50Q9UI38 385 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 EMC9Q9Y3B6 208 aa26.75■■□□□ 1.87
CCM2-219ENST00000544363 SVILO95425 2214 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 CD8BP10966 210 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 SERPINB10P48595 397 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 TUBA1BP68363 451 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 INSL4Q14641 139 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 TUBA1AQ71U36 451 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 ABHD12BQ7Z5M8 362 aaPredicted RBP26.74■■□□□ 1.87
CCM2-219ENST00000544363 CD163Q86VB7 1156 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 FBXO17Q96EF6 278 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 SH3GL3Q99963 347 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 FBXL3Q9UKT7 428 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 FREM1Q5H8C1 2179 aa26.74■■□□□ 1.87
CCM2-219ENST00000544363 NCOA6Q14686 2063 aaPredicted RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 MBD3L4A6NDZ8 208 aaPredicted RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 MBD3L3A6NE82 208 aaPredicted RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 MBD3L5A6NJ08 208 aaPredicted RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 FIGNL2A6NMB9 653 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 SRSF10O75494 262 aaKnown RBP26.73■■□□□ 1.87
CCM2-219ENST00000544363 ZFPL1O95159 310 aa26.73■■□□□ 1.87
CCM2-219ENST00000544363 DCTDP32321 178 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms