RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 LOC390937A0A1W2PQ73 354 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 M0R233 179 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 NDUFS8O00217 210 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 CLPTM1O96005 669 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 RENP00797 406 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 CST1P01037 141 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 LCKP06239 509 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 HOXB4P17483 251 aaPredicted RBP13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 GSTM3P21266 225 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 CCNOP22674 350 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 ALDH3B1P43353 468 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 PDLIM4P50479 330 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 FLOT2Q14254 428 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 MAD2L1BPQ15013 274 aaPredicted RBP13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 VASH1Q7L8A9 365 aaPredicted RBP13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 JAZF1Q86VZ6 243 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 C1orf174Q8IYL3 243 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 OR1J1Q8NGS3 322 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 SYNPRQ8TBG9 265 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 MARS2Q96GW9 593 aaKnown RBP13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 RACGAP1Q9H0H5 632 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 OR51B6Q9H340 312 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 RERGLQ9H628 205 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 SRA1Q9HD15 236 aaKnown RBP13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 ASH2LQ9UBL3 628 aa13.24□□□□□ -0.29
ECHDC2-223ENST00000542552 SVEP1Q4LDE5 3571 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 ARRDC5A6NEK1 342 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 OR6C6A6NF89 314 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 SGCEO43556 437 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 GPANK1O95872 356 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 IGHV3-13P01766 116 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 TFP02787 698 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 ERCC1P07992 297 aaPredicted RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 DAOP14920 347 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 GIFP27352 417 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 NOS3P29474 1203 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 KLF3P57682 345 aaPredicted RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 COX10Q12887 443 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 CCDC92Q53HC0 331 aaPredicted RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 SLC35F1Q5T1Q4 408 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 OTPQ5XKR4 325 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 RFPL4BQ6ZWI9 263 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 TMEM179BQ7Z7N9 219 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 SPATA24Q86W54 205 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 LNX2Q8N448 690 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 SDR9C7Q8NEX9 313 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 SLC26A10Q8NG04 563 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 OR10G2Q8NGC3 310 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 OR52E2Q8NGJ4 325 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 SLCO4A1Q96BD0 722 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 FEVQ99581 238 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 RPRD1BQ9NQG5 326 aaKnown RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 EIF3KQ9UBQ5 218 aaKnown RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 ATPIF1Q9UII2 106 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 NDRG4Q9ULP0 352 aaKnown RBP13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 LHFPL6Q9Y693 200 aa13.23□□□□□ -0.29
ECHDC2-223ENST00000542552 H3BSA7 217 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 DOK2O60496 412 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 ATP5HO75947 161 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 NGFP01138 241 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 NR4A2P43354 598 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 SELENOVP59797 346 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 GLO1Q04760 184 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 TMEM255AQ5JRV8 349 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 UNQ6126/PRO20091Q6UXV3 157 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 ZNF786Q8N393 782 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 OR4Q3Q8NH05 313 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 GIPC3Q8TF64 312 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 C4orf45Q96LM5 186 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 NIPSNAP1Q9BPW8 284 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 TSSK6Q9BXA6 273 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 TPK1Q9H3S4 243 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 SLCO1C1Q9NYB5 712 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 TAAR3PQ9P1P4 343 aa13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 SONP18583 2426 aaKnown RBP13.22□□□□□ -0.29
ECHDC2-223ENST00000542552 A0A1W2PPW3 197 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 RER1O15258 196 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 FKBP6O75344 327 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 NAT2P11245 290 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 USF1P22415 310 aaPredicted RBP13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 HTR5AP47898 357 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 RASSF2P50749 326 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 MEP1BQ16820 701 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 ZNF718Q3SXZ3 478 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 MBNL2Q5VZF2 373 aaKnown RBP13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 ARL9Q6T311 187 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 GJC3Q8NFK1 279 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 OR1F12Q8NHA8 337 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 ABHD4Q8TB40 342 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 SLC25A40Q8TBP6 338 aa13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 KLF14Q8TD94 323 aaPredicted RBP13.21□□□□□ -0.29
ECHDC2-223ENST00000542552 UBASH3BQ8TF42 649 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms