RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ACAD8Q9UKU7 415 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 PATJQ8NI35 1801 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 ACACAQ13085 2346 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 GNB3P16520 340 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 BTG1P62324 171 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 HSF1Q00613 529 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 TMEM164Q5U3C3 297 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 STOML3Q8TAV4 291 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 ARL5BQ96KC2 179 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 F8W036 122 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 ZNF806P0C7X5 589 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 BLOC1S1P78537 153 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 ESCO2Q56NI9 601 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 FAM71CQ8NEG0 241 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 OR1L3Q8NH93 324 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 SMIM4Q8WVI0 70 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 YIPF5Q969M3 257 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 RAB3CQ96E17 227 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 SDHCQ99643 169 aaPredicted RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 NSG1A0A0A6YYJ2 146 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 OR7C1O76099 320 aaPredicted RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 CNOT4O95628 575 aaKnown RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 MRPS10P82664 201 aaKnown RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 SLC35D3Q5M8T2 416 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 ZNF679Q8IYX0 411 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 GSX2Q9BZM3 304 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 VN1R1Q9GZP7 353 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 WWTR1Q9GZV5 400 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 NXPH3O95157 252 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 RECKO95980 971 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 RAF1P04049 648 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 THY1P04216 161 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 CAV2P51636 162 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 DCAF7P61962 342 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 FOXF1Q12946 379 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 SLC17A1Q14916 467 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 PDCD1Q15116 288 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 TCEAL6Q6IPX3 200 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 MFSD8Q8NHS3 518 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 BORCS8Q96FH0 119 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 WDR89Q96FK6 387 aaPredicted RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 EXOGQ9Y2C4 368 aaKnown RBP14.56□□□□□ -0.08
VARS2-212ENST00000542001 KCNIP3Q9Y2W7 256 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 SLCO1B1Q9Y6L6 691 aa14.56□□□□□ -0.08
VARS2-212ENST00000542001 ESPL1Q14674 2120 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 CT45A8P0DMV1 189 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 CT45A9P0DMV2 189 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 FCARP24071 287 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 S100A11P31949 105 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 CT45A2Q5DJT8 189 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 NLRC3Q7RTR2 1065 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 ASB17Q8WXJ9 295 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 PNPLA2Q96AD5 504 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SORCS2Q96PQ0 1159 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 EIF5A2Q9GZV4 153 aaKnown RBP14.55□□□□□ -0.08
VARS2-212ENST00000542001 HIF3AQ9Y2N7 669 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 TRAV8-7A0A075B6U6 113 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 H7C2Y5 167 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 STK17BO94768 372 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 ABOP16442 354 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 AGTR1P30556 359 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 MTCP1P56278 107 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 VASH2Q86V25 355 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 GPBAR1Q8TDU6 330 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 VSTM2LQ96N03 204 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SLC22A11Q9NSA0 550 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 DSPPQ9NZW4 1301 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 METTL12A8MUP2 240 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 RAD51DO75771 328 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 RPA2P15927 270 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 OMGP23515 440 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 S100GP29377 79 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 OPRM1P35372 400 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 ARSKQ6UWY0 536 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 BEND4Q6ZU67 534 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SLC22A18ASQ8N1D0 253 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SLAMF6Q96DU3 332 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SCGB3A2Q96PL1 93 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SLC7A11Q9UPY5 501 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 SIT1Q9Y3P8 196 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 ZSWIM8A7E2V4 1837 aa14.55□□□□□ -0.08
VARS2-212ENST00000542001 STMND1H3BQB6 276 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 TP53P04637 393 aaPredicted RBP14.54□□□□□ -0.08
VARS2-212ENST00000542001 NGFRP08138 427 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 QDPRP09417 244 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 EPHA1P21709 976 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 AVPR2P30518 371 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 NANOS3P60323 173 aaKnown RBP14.54□□□□□ -0.08
VARS2-212ENST00000542001 LINC00696Q6ZRV3 163 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 P4HA3Q7Z4N8 544 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 PXKQ7Z7A4 578 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 CMIPQ8IY22 773 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 IL1F10Q8WWZ1 152 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 SGCZQ96LD1 299 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 TSPAN32Q96QS1 320 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 VRK1Q99986 396 aaPredicted RBP14.54□□□□□ -0.08
VARS2-212ENST00000542001 MARVELD1Q9BSK0 173 aa14.54□□□□□ -0.08
VARS2-212ENST00000542001 SNRNP200O75643 2136 aaKnown RBP14.54□□□□□ -0.08
VARS2-212ENST00000542001 NAT1P18440 290 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms