RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
SNHG1-213ENST00000540725 ZMYND19Q96E35 227 aaPredicted RBP11.94□□□□□ -0.5
SNHG1-213ENST00000540725 GMPR2Q9P2T1 348 aaKnown RBP11.94□□□□□ -0.5
SNHG1-213ENST00000540725 NPTNQ9Y639 398 aa11.94□□□□□ -0.5
SNHG1-213ENST00000540725 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
SNHG1-213ENST00000540725 A0A087WUU8 490 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 FFAR1O14842 300 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 DOK2O60496 412 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 FOXH1O75593 365 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 PRSS23O95084 383 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 IGHV2-70P01814 119 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 COX5BP10606 129 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 GSTM3P21266 225 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 ZFP36P26651 326 aaKnown RBP11.93□□□□□ -0.5
SNHG1-213ENST00000540725 HTR5AP47898 357 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 SCRN3Q0VDG4 424 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 CDK5R2Q13319 367 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 CGB2Q6NT52 195 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 TREML1Q86YW5 311 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 RNF113BQ8IZP6 322 aaKnown RBP11.93□□□□□ -0.5
SNHG1-213ENST00000540725 ACOT11Q8WXI4 607 aaPredicted RBP11.93□□□□□ -0.5
SNHG1-213ENST00000540725 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 RCN3Q96D15 328 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 DCLRE1CQ96SD1 692 aaKnown RBP11.93□□□□□ -0.5
SNHG1-213ENST00000540725 WACQ9BTA9 647 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 POFUT1Q9H488 388 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 ESM1Q9NQ30 184 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 TBCCD1Q9NVR7 557 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
SNHG1-213ENST00000540725 CMTM6Q9NX76 183 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 PURGQ9UJV8 347 aaKnown RBP11.93□□□□□ -0.5
SNHG1-213ENST00000540725 ADAM18Q9Y3Q7 739 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 MEGF8Q7Z7M0 2845 aa11.93□□□□□ -0.5
SNHG1-213ENST00000540725 PPIAL4EA0A075B759 164 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 PPIAL4CA0A0B4J2A2 164 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 PPIAL4DF5H284 164 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 XKRYO14609 159 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 CDC42EP2O14613 210 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SGCEO43556 437 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SPRY1O43609 319 aaPredicted RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZNF682O95780 498 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SBK2P0C263 348 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 PPIAL4FP0DN26 164 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TNFSF4P23510 183 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 FPR2P25090 351 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 RPL4P36578 427 aaKnown RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 GPR4P46093 362 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 MESTQ5EB52 335 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TBPL2Q6SJ96 375 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZNF730Q6ZMV8 503 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ARPINQ7Z6K5 226 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 POU5F2Q8N7G0 328 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 FAM156AQ8NDB6 213 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 DVL3Q92997 716 aaPredicted RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 Q96M85 177 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TMEM106BQ9NUM4 274 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 AP3M1Q9Y2T2 418 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SASH3O75995 380 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 CD14P08571 375 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 H2AFXP16104 143 aaPredicted RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZNF26P17031 533 aaPredicted RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TNFRSF1AP19438 455 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 KITLGP21583 273 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TUBG1P23258 451 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 RBMXP38159 391 aaKnown RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZBED5Q49AG3 693 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 IFI44LQ53G44 452 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 Q6ZR03 302 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TMPRSS11FQ6ZWK6 438 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 MBOAT2Q6ZWT7 520 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 VASH1Q7L8A9 365 aaPredicted RBP11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SLC15A3Q8IY34 581 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 KLHL36Q8N4N3 616 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SPICQ8N5J4 248 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZNF283Q8N7M2 679 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 OR2Z1Q8NG97 314 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 CMBLQ96DG6 245 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 SAMD8Q96LT4 415 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ZNF570Q96NI8 536 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TUBG2Q9NRH3 451 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 ARMCX1Q9P291 453 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 EGFL7Q9UHF1 273 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 STARD10Q9Y365 291 aa11.92□□□□□ -0.5
SNHG1-213ENST00000540725 TEX13CA0A0J9YWL9 993 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 PRSS37A4D1T9 235 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 CXCR6O00574 342 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 SLC22A2O15244 555 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 AHCYL1O43865 530 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 CTLA4P16410 223 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 EGR1P18146 543 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 UBA52P62987 128 aaKnown RBP11.91□□□□□ -0.5
SNHG1-213ENST00000540725 LIPEQ05469 1076 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 AQP6Q13520 282 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 AWAT1Q58HT5 328 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 FKBP9P1Q75LS8 142 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 CBLL1Q75N03 491 aa11.91□□□□□ -0.5
SNHG1-213ENST00000540725 RRM2BQ7LG56 351 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms