RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 FAM219AQ8IW50 185 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 CLEC1AQ8NC01 280 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 OR52N5Q8NH56 324 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 SEH1LQ96EE3 360 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 MS4A7Q9GZW8 240 aaPredicted RBP12.58□□□□□ -0.39
UBE3B-210ENST00000539599 ARL6Q9H0F7 186 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 FBXL2Q9UKC9 423 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 MAB21L2Q9Y586 359 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 RALGAPA1Q6GYQ0 2036 aa12.58□□□□□ -0.39
UBE3B-210ENST00000539599 CDAP32320 146 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 GALNSP34059 522 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 NXPH1P58417 271 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBE3B-210ENST00000539599 FOXF1Q12946 379 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 CARD17Q5XLA6 110 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 OR2AK2Q8NG84 335 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 STT3BQ8TCJ2 826 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 MED30Q96HR3 178 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 SLC7A5P2Q9GIP4 190 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 KLK13Q9UKR3 277 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 ASPMQ8IZT6 3477 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 FTCDNL1E5RQL4 147 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 EFNA2O43921 213 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 GIPP09681 153 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-210ENST00000539599 SLC26A5P58743 744 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 MFAP5Q13361 173 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 HLXQ14774 488 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-210ENST00000539599 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 IDO2Q6ZQW0 420 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 DNM1P46Q6ZS02 220 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 GRINAQ7Z429 371 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-210ENST00000539599 SLC26A10Q8NG04 563 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 OR1J2Q8NGS2 313 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 ANGPTL6Q8NI99 470 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 GSX2Q9BZM3 304 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 G6PC2Q9NQR9 355 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-210ENST00000539599 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.4
UBE3B-210ENST00000539599 VSX1Q9NZR4 365 aaPredicted RBP12.58□□□□□ -0.4
UBE3B-210ENST00000539599 TMEM269A0A1B0GVZ9 245 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 SPDEFO95238 335 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 AMY2AP04746 511 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 ACSM4P0C7M7 580 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 AKAIN1P0CW23 69 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 MNDAP41218 407 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 DNASE1L1P49184 302 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 GLO1Q04760 184 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 ATXN7L3Q14CW9 347 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-210ENST00000539599 FAM166AQ6J272 317 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 GLRX5Q86SX6 157 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF441Q8N8Z8 693 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 FGGYQ96C11 551 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF501Q96CX3 271 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-210ENST00000539599 C5orf34Q96MH7 638 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 CCNL2Q96S94 520 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-210ENST00000539599 MNTQ99583 582 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 GPN1Q9HCN4 374 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-210ENST00000539599 A0A1B0GX78 115 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 A0A1W2PNR3 127 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 OR2A4O95047 310 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 CPN1P15169 458 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 GNALP38405 381 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 SEC61A1P61619 476 aaKnown RBP12.57□□□□□ -0.4
UBE3B-210ENST00000539599 GFOD2Q3B7J2 385 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 PXDC1Q5TGL8 231 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 APCDD1LQ8NCL9 501 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 NUDCD2Q8WVJ2 157 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 WBP1Q96G27 269 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 SEC22AQ96IW7 307 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 OR2A7Q96R45 310 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 APMAPQ9HDC9 416 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 EPHA6Q9UF33 1036 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 OR52A1Q9UKL2 312 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 AUP1Q9Y679 476 aa12.57□□□□□ -0.4
UBE3B-210ENST00000539599 EML6Q6ZMW3 1958 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 NPIPA5E9PKD4 350 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 EIF4E2O60573 245 aaKnown RBP12.56□□□□□ -0.4
UBE3B-210ENST00000539599 RAMP1O60894 148 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 RAB3DO95716 219 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 CSF1P09603 554 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 MRPS10P82664 201 aaKnown RBP12.56□□□□□ -0.4
UBE3B-210ENST00000539599 NHLRC3Q5JS37 347 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 LCN10Q6JVE6 187 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 TMUB2Q71RG4 321 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 EID2Q8N6I1 236 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 OR52N4Q8NGI2 321 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 GPX8Q8TED1 209 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 TTC9Q92623 222 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 SLC41A2Q96JW4 573 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 PTTG3PQ9NZH4 202 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 NPIPA1Q9UND3 350 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 UBE2QL1A1L167 161 aa12.56□□□□□ -0.4
UBE3B-210ENST00000539599 ZNF814B7Z6K7 855 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms