RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 CLDN6P56747 220 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 RIGQ13278 110 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 GABRA6Q16445 453 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 DGUOKQ16854 277 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PGGHGQ32M88 737 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 FNDC1Q4ZHG4 1894 aaPredicted RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 RFTN2Q52LD8 501 aaPredicted RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 EIPR1Q53HC9 387 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 RBM48Q5RL73 367 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 IDNKQ5T6J7 187 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 OR2G6Q5TZ20 316 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 RESP18Q5W5W9 173 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 OR5M10Q6IEU7 315 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF782Q6ZMW2 699 aaPredicted RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PIWIL4Q7Z3Z4 852 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 NUFIP2Q7Z417 695 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 YTHDF3Q7Z739 585 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC47A2Q86VL8 602 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 UNC93AQ86WB7 457 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 APOBEC3FQ8IUX4 373 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 GID4Q8IVV7 300 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 LINC01561Q8N1V8 128 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 OR2L13Q8N349 312 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 CCNYL1Q8N7R7 359 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 MAPKAPK5-AS1Q8N8E1 139 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 OR2Y1Q8NGV0 311 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 OR2L2Q8NH16 312 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 FBXO25Q8TCJ0 367 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 IGFBPL1Q8WX77 278 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 BAALCQ8WXS3 180 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 TADA1Q96BN2 335 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 CMTM5Q96DZ9 223 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF75AQ96N20 296 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 LPAR4Q99677 370 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PRSS22Q9GZN4 317 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PORCNQ9H237 461 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PLEKHA1Q9HB21 404 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 APOBEC3GQ9HC16 384 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 TAS2R7Q9NYW3 318 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF224Q9NZL3 707 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 UBQLN1Q9UMX0 589 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 GMPPBQ9Y5P6 360 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 V9GYQ6 96 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ECM29Q5VYK3 1845 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ROCK1Q13464 1354 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 IGHV2-70DA0A0C4DH43 119 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 A0A1W2PQL4 384 aaPredicted RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 LINC01553A4QN01 128 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 PLPP3O14495 311 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC16A4O15374 487 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 GATCO43716 136 aaKnown RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 XPNPEP2O43895 674 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 PFKFB2O60825 505 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 OR7A10O76100 309 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 RCBTB2O95199 551 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TNFAIP8O95379 198 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TIMP1P01033 207 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 JCHAINP01591 159 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 RHOCP08134 193 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TACSTD2P09758 323 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 MGMTP16455 207 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 POLR2EP19388 210 aaKnown RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 RAB4AP20338 218 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 SSTR2P30874 369 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 ARR3P36575 388 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 COILP38432 576 aaPredicted RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 XCR1P46094 333 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 GTF2A1P52655 376 aaPredicted RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 NKX2-5P52952 324 aaPredicted RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 XGP55808 180 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 DCDC1P59894 354 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 ERVS71-1P61550 626 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 MGAT3Q09327 533 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 C2orf80Q0P641 193 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 ST3GAL3Q11203 375 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 CDC20Q12834 499 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TPBGQ13641 420 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 KLF9Q13886 244 aaPredicted RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 DPYSL3Q14195 570 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 GNMTQ14749 295 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 DAZAP2Q15038 168 aaPredicted RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TMED2Q15363 201 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 SF3A2Q15428 464 aaKnown RBP3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 DUSP5Q16690 384 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 ATP6V1FQ16864 119 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TMEM249Q2WGJ8 235 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF260Q3ZCT1 412 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TMEM52BQ4KMG9 183 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 TIMM23BQ5SRD1 257 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 SDHAF4Q5VUM1 108 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 EMBQ6PCB8 327 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 METTL7BQ6UX53 244 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 COX15Q7KZN9 410 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 C16orf82Q7Z2V1 217 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 CMTM1Q8IZ96 169 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 PGAM4Q8N0Y7 254 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 CYP4Z2PQ8N1L4 340 aa3.22□□□□□ -1.89
AC055720.1-201ENST00000539552 PGBD5Q8N414 524 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms