RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 RBM38Q9H0Z9 239 aaKnown RBP13.71□□□□□ -0.22
SFSWAP-206ENST00000537582 SLCO1C1Q9NYB5 712 aa13.71□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF629Q9UEG4 869 aaPredicted RBP13.71□□□□□ -0.22
SFSWAP-206ENST00000537582 LSM2Q9Y333 95 aaKnown RBP13.71□□□□□ -0.22
SFSWAP-206ENST00000537582 PCDHGB1Q9Y5G3 927 aa13.71□□□□□ -0.22
SFSWAP-206ENST00000537582 A8MXE2 369 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 LALBAP00709 142 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 OR8G3PP0DMU2 310 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 OR12D2P58182 307 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 LSM6P62312 80 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF684Q5T5D7 378 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF322Q6U7Q0 402 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 LRRN1Q6UXK5 716 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF627Q7L945 461 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 ABHD12BQ7Z5M8 362 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 ALDH16A1Q8IZ83 802 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF485Q8NCK3 441 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 SPRYD4Q8WW59 207 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 GATAD2BQ8WXI9 593 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 C4orf36Q96KX1 117 aa13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 PNRC2Q9NPJ4 139 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 MRM2Q9UI43 246 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-206ENST00000537582 E9PI62 339 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 J3QLW9 94 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 MYL12BO14950 172 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 MRPS14O60783 128 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 CNOT4O95628 575 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 CST2P09228 141 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF19P17023 458 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF32P17041 273 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 TBCEQ15813 527 aaPredicted RBP13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 STK11Q15831 433 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 GABRA6Q16445 453 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 TBRG1Q3YBR2 411 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 ANKRD16Q6P6B7 361 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 SLC16A14Q7RTX9 510 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 OR52N5Q8NH56 324 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 TMIGD2Q96BF3 282 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 DGCR14Q96DF8 476 aaKnown RBP13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 INPP5EQ9NRR6 644 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 ACOXLQ9NUZ1 547 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 ERGIC3Q9Y282 383 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 GRIP1Q9Y3R0 1128 aa13.69□□□□□ -0.22
SFSWAP-206ENST00000537582 CHD6Q8TD26 2715 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 CIB4A0PJX0 185 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 DVL2O14641 736 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 MSTNO14793 375 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 ABHD16AO95870 558 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 MMP7P09237 267 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 PSMB10P40306 273 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 CAPZA2P47755 286 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 ALDH3B2P48448 385 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 FAM27E3Q08E93 113 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 AQP6Q13520 282 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 MED22Q15528 200 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 CDONQ4KMG0 1287 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 CCDC92Q53HC0 331 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 RNLSQ5VYX0 342 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 STAC2Q6ZMT1 411 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 BEND4Q6ZU67 534 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 KLHL36Q8N4N3 616 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 SVOPQ8N4V2 548 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 ZFP41Q8N8Y5 198 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 OR2AJ1Q8NGZ0 328 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 AKR7LQ8NHP1 331 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 SNX33Q8WV41 574 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 RNF166Q96A37 237 aaPredicted RBP13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 SLAMF6Q96DU3 332 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 PIGMQ9H3S5 423 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 CENPMQ9NSP4 180 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 CHCHD3Q9NX63 227 aaKnown RBP13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 PTTG2Q9NZH5 202 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 JKAMPQ9P055 326 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 GNG8Q9UK08 70 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 IKZF2Q9UKS7 526 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 FBXL3Q9UKT7 428 aa13.68□□□□□ -0.22
SFSWAP-206ENST00000537582 TMEM129A0AVI4 362 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 FAM90A27PA6NNH2 459 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 CD79AP11912 226 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 GP2P55259 537 aaKnown RBP13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 HIST1H3AP68431 136 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 PSG4Q00888 419 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 SFRP5Q5T4F7 317 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 HIST2H3PS2Q5TEC6 136 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 OR7E24Q6IFN5 339 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF774Q6NX45 483 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 HIST2H3AQ71DI3 136 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 MRGPRGQ86SM5 289 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 KLBQ86Z14 1044 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 ZNF454Q8N9F8 522 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 HSD17B8Q92506 261 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 SLC7A6Q92536 515 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 MUL1Q969V5 352 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 OR8B4Q96RC9 309 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 WNT5BQ9H1J7 359 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 C1orf198Q9H425 327 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 ELOVL3Q9HB03 270 aa13.67□□□□□ -0.22
SFSWAP-206ENST00000537582 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms