RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 BNIP1Q12981 228 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SNTB2Q13425 540 aaKnown RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 EXOSC2Q13868 293 aaKnown RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 RCAN2Q14206 197 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 FASTKD3Q14CZ7 662 aaKnown RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 MS4A18Q3C1V0 323 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SLC36A3Q495N2 470 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 UNC50Q53HI1 259 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 MUC21Q5SSG8 566 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 BEND6Q5SZJ8 279 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 NCMAPQ5T1S8 102 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 DMKNQ6E0U4 476 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 LEG1Q6P5S2 330 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 GDPGP1Q6ZNW5 385 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 RTL4Q6ZR62 310 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 CENPUQ71F23 418 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 KIAA1328Q86T90 577 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 ZNF614Q8N883 585 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 ZNF781Q8N8C0 355 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 LINC01555Q8NAE3 123 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 APCDD1LQ8NCL9 501 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 MNS1Q8NEH6 495 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 NFAM1Q8NET5 270 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 C11orf45Q8TAV5 145 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 MUC7Q8TAX7 377 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 ZPLD1Q8TCW7 415 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 FAM172AQ8WUF8 416 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 KCTD4Q8WVF5 259 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 TFGQ92734 400 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 C11orf52Q96A22 123 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SLC25A36Q96CQ1 311 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 STARD4Q96DR4 205 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 COL21A1Q96P44 957 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SLC39A3Q9BRY0 314 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 TBCDQ9BTW9 1192 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 MRPL13Q9BYD1 178 aaKnown RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 DEFB126Q9BYW3 111 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 ALG9Q9H6U8 611 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 ELL3Q9HB65 397 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 CRLF2Q9HC73 371 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 NT5MQ9NPB1 228 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 FAIMQ9NVQ4 179 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SMOXQ9NWM0 555 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 C1orf123Q9NWV4 160 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 TAS2R16Q9NYV7 291 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 THYN1Q9P016 225 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 CLCF1Q9UBD9 225 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SEC14L4Q9UDX3 406 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 MGAT4AQ9UM21 535 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 V9GYY5 206 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 SCN3AQ9NY46 2000 aa3.19□□□□□ -1.9
SNHG1-203ENST00000537024 PLECQ15149 4684 aaKnown RBP3.19□□□□□ -1.9
SNHG1-203ENST00000537024 ARFGEF3Q5TH69 2177 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 MUC4Q99102 2169 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 NPIPA5A0A0B4J1W7 369 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 TRBV5-4A0A0C4DH59 114 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 H0YGG7 62 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 GOLGA8MH3BSY2 632 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 K7EIL1 84 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 GOT2P00505 430 aaKnown RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 OR9G9P0C7N8 305 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 PIRTP0C851 137 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 CFC1BP0CG36 223 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 CFC1P0CG37 223 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 CCL3P10147 92 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 UQCRBP14927 111 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 ATP6V1C1P21283 382 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 TBXA2RP21731 343 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 HTR2AP28223 471 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 SDC4P31431 198 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 CDH5P33151 784 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 TAGLN2P37802 199 aaKnown RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 XCR1P46094 333 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 PRLHRP49683 370 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 SRPXP78539 464 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 FKBP3Q00688 224 aaKnown RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 PIGHQ14442 188 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 RAB35Q15286 201 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 NSDHLQ15738 373 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 TAF9Q16594 264 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 C2CD6Q53TS8 623 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 ATAD3BQ5T9A4 648 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 NCR3LG1Q68D85 454 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 ZYG11AQ6WRX3 759 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 NUFIP2Q7Z417 695 aaKnown RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 NET1Q7Z628 596 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 LRRTM1Q86UE6 522 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 CDKL3Q8IVW4 592 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-203ENST00000537024 BPIFB2Q8N4F0 458 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 CSNK1A1LQ8N752 337 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 SAMD12Q8N8I0 201 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 AQP11Q8NBQ7 271 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 PLPP5Q8NEB5 264 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 OR52J3Q8NH60 311 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 AGR3Q8TD06 166 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 DTX3LQ8TDB6 740 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 ASZ1Q8WWH4 475 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 LHX4Q969G2 390 aa3.18□□□□□ -1.9
SNHG1-203ENST00000537024 TUBGCP3Q96CW5 907 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms