RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 OR2AJ1Q8NGZ0 328 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 ASB5Q8WWX0 329 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 PHF21AQ96BD5 680 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 INTS12Q96CB8 462 aaKnown RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 LIN37Q96GY3 246 aaPredicted RBP12.12□□□□□ -0.47
SMG6-203ENST00000536871 NPAS1Q99742 590 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 IRF2BPLQ9H1B7 796 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 CYB5R1Q9UHQ9 305 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 MPDZO75970 2070 aa12.12□□□□□ -0.47
SMG6-203ENST00000536871 TNRC18O15417 2968 aaPredicted RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 A0A0A6YYH2 397 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 TMEM269A0A1B0GVZ9 245 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 A6NJ64 397 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 ZSCAN5BA6NJL1 495 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 XRCC3O43542 346 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 TRAF3IP2O43734 574 aaPredicted RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 LANCL1O43813 399 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 MAS1P04201 325 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 FAUP35544 74 aaKnown RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 GDNFP39905 211 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 GUCA1AP43080 201 aaPredicted RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 RPS15P62841 145 aaKnown RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 CTAG1AP78358 180 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 DGCR2P98153 550 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 TAGLNQ01995 201 aaKnown RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 KLF9Q13886 244 aaPredicted RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 ELFN2Q5R3F8 820 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 BCL2L15Q5TBC7 163 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 PNPLA2Q96AD5 504 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 CACNG6Q9BXT2 260 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 ZNF160Q9HCG1 818 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 ING1Q9UK53 422 aaPredicted RBP12.11□□□□□ -0.47
SMG6-203ENST00000536871 DKKL1Q9UK85 242 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 TCFL5Q9UL49 500 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 CLEC4AQ9UMR7 237 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 GTF2A1LQ9UNN4 478 aa12.11□□□□□ -0.47
SMG6-203ENST00000536871 TRAV8-7A0A075B6U6 113 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 A0A0B4J203 849 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 BET1O15155 118 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 PRAF2O60831 178 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 TCRBP04435 133 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 CD3GP09693 182 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 DNASE1L1P49184 302 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 FMODQ06828 376 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 HIST3H3Q16695 136 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 PRAMEF20Q5VT98 475 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 BTN2A1Q7KYR7 527 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 SIAH3Q8IW03 269 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 OR6M1Q8NGM8 313 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 OR56B4Q8NH76 319 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 KCNE4Q8WWG9 221 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 PTX4Q96A99 478 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 ARRDC1-AS1Q9H2J1 176 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 G6PC2Q9NQR9 355 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 NUFIP1Q9UHK0 495 aaKnown RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 EMC9Q9Y3B6 208 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 A0A0B4J293 547 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 A0A1B0GTH9 108 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 ZNF878C9JN71 531 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 PNPP00491 289 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 P04436 131 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 IGFBP3P17936 291 aaPredicted RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 SRD5A2P31213 254 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 PTH2RP49190 550 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 RAC1P63000 192 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 H3F3AP84243 136 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 TMEM164Q5U3C3 297 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 H3F3CQ6NXT2 135 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 LRFN4Q6PJG9 635 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 DNM1P46Q6ZS02 220 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 RAB11FIP2Q7L804 512 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 OR13C3Q8NGS6 347 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 ATOH1Q92858 354 aaPredicted RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 SLAMF6Q96DU3 332 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 SMAD5Q99717 465 aaKnown RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 SLC22A13Q9Y226 551 aa12.1□□□□□ -0.47
SMG6-203ENST00000536871 FARSAQ9Y285 508 aaKnown RBP12.1□□□□□ -0.47
SMG6-203ENST00000536871 A0A1B0GVC2 190 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 A6NIN4 97 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 A6NL46 340 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 SULT1C2O00338 296 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 CDK2AP1O14519 115 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 SCGNO76038 276 aa12.09□□□□□ -0.47
SMG6-203ENST00000536871 GLSO94925 669 aaPredicted RBP12.09□□□□□ -0.47
SMG6-203ENST00000536871 SERPINA7P05543 415 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms