RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TEX12Q9BXU0 123 aa15.39■□□□□ 0.05
TNFRSF1A-209ENST00000536717 C8orf4Q9NR00 106 aa15.39■□□□□ 0.05
TNFRSF1A-209ENST00000536717 NKX1-2Q9UD57 310 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF1A-209ENST00000536717 FKBP7Q9Y680 259 aa15.39■□□□□ 0.05
TNFRSF1A-209ENST00000536717 VSTM5A8MXK1 200 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CASQ2O14958 399 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MMP7P09237 267 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PEX2P28328 305 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PCSK6P29122 969 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CDAP32320 146 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 GLRXP35754 106 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MRPS34P82930 218 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 GINS1Q14691 196 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC36A2Q495M3 483 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MESTQ5EB52 335 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LPCAT4Q643R3 524 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 DPPA2Q7Z7J5 298 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 JAZF1Q86VZ6 243 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ZCCHC24Q8N2G6 241 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LRRC18Q8N456 261 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 NSMAFQ92636 917 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC29A1Q99808 456 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CMAHPQ9Y471 501 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 AHCYL1O43865 530 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CSF3P09919 207 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC25A16P16260 332 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC35F1Q5T1Q4 408 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 TMEM53Q6P2H8 277 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PAQR4Q8N4S7 273 aaPredicted RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC30A7Q8NEW0 376 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 OR4Q3Q8NH05 313 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MRPL24Q96A35 216 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RBP7Q96R05 134 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MRPL37Q9BZE1 423 aaKnown RBP15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RIBC2Q9H4K1 309 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RNF121Q9H920 327 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SIAEQ9HAT2 523 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SPEF1Q9Y4P9 236 aa15.38■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PRSS37A4D1T9 235 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ATP6V1G2O95670 118 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 IFNGP01579 166 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 HMGN1P05114 100 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CCL2P13500 99 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 HIST1H1CP16403 213 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 GRK5P34947 590 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CDK5Q00535 292 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 GALK2Q01415 458 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LOXL1Q08397 574 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PTGES3Q15185 160 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 THEM4Q5T1C6 240 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 OGFRL1Q5TC84 451 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 IQCF1Q8N6M8 205 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PACRGLQ8N7B6 248 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 OR4K13Q8NH42 304 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 GABARAPL3Q9BY60 117 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 VCXQ9H320 206 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC25A19Q9HC21 320 aa15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 FBXO9Q9UK97 447 aaPredicted RBP15.37■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SVEP1Q4LDE5 3571 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 H7C1C5 153 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RENP00797 406 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PDLIM4P50479 330 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LCN6P62502 163 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 GALNT4Q8N4A0 578 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 OR52E2Q8NGJ4 325 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PRRG3Q9BZD7 231 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RAB1BQ9H0U4 201 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 KLHL21Q9UJP4 597 aa15.36■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SLC22A23A1A5C7 686 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RIIAD1A6NNX1 92 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 VWC2LB2RUY7 222 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CD5LO43866 347 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SNAP29O95721 258 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ZNF3P17036 446 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ZNF32P17041 273 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CDKN2AP42771 156 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 EVX1P49640 407 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RPS23P62266 143 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 TMEM249Q2WGJ8 235 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 TMEM236Q5W0B7 351 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ACSM5Q6NUN0 579 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LEG1Q6P5S2 330 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 FOXL2NBQ6ZUU3 175 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PTCHD4Q6ZW05 846 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 LRP11Q86VZ4 500 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CPEB3Q8NE35 698 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SDR9C7Q8NEX9 313 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 PLEKHA8Q96JA3 519 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 RDH12Q96NR8 316 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SNX18Q96RF0 628 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 NMNAT3Q96T66 252 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 SYT4Q9H2B2 425 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 C1orf198Q9H425 327 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 MYEF2Q9P2K5 600 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 FZR1Q9UM11 496 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 CUBNO60494 3623 aa15.35■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ZAR1LA6NP61 321 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 NDUFS8O00217 210 aa15.34■□□□□ 0.05
TNFRSF1A-209ENST00000536717 ADRA2AP08913 450 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms