RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 UGT2A3Q6UWM9 527 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 VASH1Q7L8A9 365 aaPredicted RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 ZNF786Q8N393 782 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 SVOPLQ8N434 492 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 AQP11Q8NBQ7 271 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 ZNF540Q8NDQ6 660 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 GJC3Q8NFK1 279 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 SLC26A10Q8NG04 563 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 OR9Q2Q8NGE9 314 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 OR52L1Q8NGH7 329 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 SYNPRQ8TBG9 265 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 C11orf40Q8WZ69 217 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 FAM168AQ92567 244 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 CCDC124Q96CT7 223 aaKnown RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 MARS2Q96GW9 593 aaKnown RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 C4orf45Q96LM5 186 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 COG8Q96MW5 612 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 NMNAT3Q96T66 252 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 IFT27Q9BW83 186 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 ELOVL3Q9HB03 270 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 SLCO1C1Q9NYB5 712 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 EIF3KQ9UBQ5 218 aaKnown RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 DNAJB9Q9UBS3 223 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 REV1Q9UBZ9 1251 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 CGGBP1Q9UFW8 167 aaPredicted RBP8.44□□□□□ -1.06
NUP98-220ENST00000533346 IL20RAQ9UHF4 553 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 GPR160Q9UJ42 338 aa8.44□□□□□ -1.06
NUP98-220ENST00000533346 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 M0R233 179 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 SGCEO43556 437 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 TLX2O43763 284 aaPredicted RBP8.43□□□□□ -1.06
NUP98-220ENST00000533346 CCL2P13500 99 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 ANXA8P13928 327 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 NOS3P29474 1203 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 WNT5AP41221 380 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 BLVRAP53004 296 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 SLC25A1P53007 311 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 SELENOVP59797 346 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 ZNF718Q3SXZ3 478 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 SLC36A3Q495N2 470 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 CCDC92Q53HC0 331 aaPredicted RBP8.43□□□□□ -1.06
NUP98-220ENST00000533346 TEX30Q5JUR7 227 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 LEG1Q6P5S2 330 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 CLEC9AQ6UXN8 241 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 JAZF1Q86VZ6 243 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 ZNF525Q8N782 197 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 OR2T33Q8NG76 320 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 OR10G2Q8NGC3 310 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 OR8D4Q8NGM9 314 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 OR4K13Q8NH42 304 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 AKR7LQ8NHP1 331 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 GIPC3Q8TF64 312 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 DNAJC9Q8WXX5 260 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 UTP4Q969X6 686 aaKnown RBP8.43□□□□□ -1.06
NUP98-220ENST00000533346 SLCO4A1Q96BD0 722 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 COQ7Q99807 217 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 SMR3AQ99954 134 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 RBM4Q9BWF3 364 aaKnown RBP8.43□□□□□ -1.06
NUP98-220ENST00000533346 PLA2G12AQ9BZM1 189 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 NMNAT2Q9BZQ4 307 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 EGLN3Q9H6Z9 239 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 ARMC1Q9NVT9 282 aa8.43□□□□□ -1.06
NUP98-220ENST00000533346 C5orf49A4QMS7 147 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 C17orf100A8MU93 164 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 FKBP6O75344 327 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 MPZL1O95297 269 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 TFP02787 698 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 TACSTD2P09758 323 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 GRK5P34947 590 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 GGT2P36268 569 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 NR4A2P43354 598 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 RGS6P49758 472 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 MMP15P51511 669 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 ARHGDIAP52565 204 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 KLF3P57682 345 aaPredicted RBP8.42□□□□□ -1.06
NUP98-220ENST00000533346 CBX1P83916 185 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.42□□□□□ -1.06
NUP98-220ENST00000533346 RIN1Q13671 783 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 PCGF3Q3KNV8 242 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 ZNF774Q6NX45 483 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 COLCA1Q6ZS62 124 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 RHOUQ7L0Q8 258 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 ASRGL1Q7L266 308 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 TMEM179BQ7Z7N9 219 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 LRP11Q86VZ4 500 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 ZNF101Q8IZC7 436 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 OR52E2Q8NGJ4 325 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 OR1J1Q8NGS3 322 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 OR2T4Q8NH00 348 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 OR1F12Q8NHA8 337 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 C1orf159Q96HA4 380 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 TSSK2Q96PF2 358 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 FEVQ99581 238 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 VRK1Q99986 396 aaPredicted RBP8.42□□□□□ -1.06
NUP98-220ENST00000533346 NIPSNAP1Q9BPW8 284 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 TSSK6Q9BXA6 273 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 HDHD2Q9H0R4 259 aa8.42□□□□□ -1.06
NUP98-220ENST00000533346 NTN4Q9HB63 628 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms