RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PDCD1LG2Q9BQ51 273 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 KLHL9Q9P2J3 617 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 ZNF726A6NNF4 738 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 AHRRA9YTQ3 701 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 OGG1O15527 345 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 RPP14O95059 124 aaKnown RBP16.35■□□□□ 0.21
SMPD1-208ENST00000533123 EDNRAP25101 427 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 CAPZA2P47755 286 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 GDI2P50395 445 aaKnown RBP16.35■□□□□ 0.21
SMPD1-208ENST00000533123 FAM205BPQ63HN1 556 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 CD163Q86VB7 1156 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 OR6X1Q8NH79 312 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 ABHD4Q8TB40 342 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 CLCF1Q9UBD9 225 aa16.35■□□□□ 0.21
SMPD1-208ENST00000533123 TRBV2A0A0J9YWF9 115 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 CTDSP2O14595 271 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 NCR1O76036 304 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 SPARCP09486 303 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 ABOP16442 354 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 CRABP1P29762 137 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 SELENOPP49908 381 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 NANOS3P60323 173 aaKnown RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 ADAM8P78325 824 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 P4HA3Q7Z4N8 544 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 TUSC5Q8IXB3 177 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 OTOSQ8NHW6 89 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 NSMAFQ92636 917 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 MRPL48Q96GC5 212 aaKnown RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 SLC25A44Q96H78 314 aaPredicted RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 MED18Q9BUE0 208 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 IKZF2Q9UKS7 526 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 ZNF175Q9Y473 711 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 CASKO14936 926 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 ABHD16AO95870 558 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 GLO1Q04760 184 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 RNPS1Q15287 305 aaKnown RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 ACSF3Q4G176 576 aaPredicted RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 MCEMP1Q8IX19 187 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 YIPF7Q8N8F6 280 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 WBP1Q96G27 269 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 MRPL13Q9BYD1 178 aaKnown RBP16.34■□□□□ 0.21
SMPD1-208ENST00000533123 SIAEQ9HAT2 523 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 SMURF1Q9HCE7 757 aa16.34■□□□□ 0.21
SMPD1-208ENST00000533123 IGKV3D-15A0A087WSY6 115 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 WNT11O96014 354 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 PGA4P0DJD7 388 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 PGA3P0DJD8 388 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 CD53P19397 219 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 GALP22466 123 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 KCNJ8Q15842 424 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 LIPNQ5VXI9 398 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 C3P1Q6ZMU1 363 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 SPATC1Q76KD6 591 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.33■□□□□ 0.2
SMPD1-208ENST00000533123 CEACAM19Q7Z692 300 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 FAM57AQ8TBR7 257 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 RNF122Q9H9V4 155 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 CALHM2Q9HA72 323 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 POLE4Q9NR33 117 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 PLEKHB1Q9UF11 243 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-208ENST00000533123 UPK3AO75631 287 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 ZNF432O94892 652 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 IGHG1P01857 330 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 CLRN1P58418 232 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 FAM220AQ7Z4H9 259 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 SLC26A10Q8NG04 563 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 OR2M2Q96R28 347 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 KCNN2Q9H2S1 579 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 SLCO1C1Q9NYB5 712 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 FREM1Q5H8C1 2179 aa16.33■□□□□ 0.2
SMPD1-208ENST00000533123 SC5DO75845 299 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 KRT8P05787 483 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 FCGR2AP12318 317 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 S100A5P33763 92 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 BLVRAP53004 296 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 RPS11P62280 158 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMPD1-208ENST00000533123 CCDC58Q4VC31 144 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 AAED1Q7RTV5 226 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 CPT1CQ8TCG5 803 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 BCO1Q9HAY6 547 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 EMC3Q9P0I2 261 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 NOSIPQ9Y314 301 aaKnown RBP16.32■□□□□ 0.2
SMPD1-208ENST00000533123 TMEM14AQ9Y6G1 99 aa16.32■□□□□ 0.2
SMPD1-208ENST00000533123 DOCK7Q96N67 2140 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 A0A075B6Q4 140 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 GPR171O14626 319 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 YES1P07947 543 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 GAAP10253 952 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 ACSM3Q53FZ2 586 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 RTL6Q6ICC9 239 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 DNM1P34Q6PK57 102 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 LRRN1Q6UXK5 716 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 HDDC2Q7Z4H3 204 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 NR2C2APQ86WQ0 139 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 GCNT2Q8N0V5 402 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 TMEM123Q8N131 208 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 NOXO1Q8NFA2 376 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 MNTQ99583 582 aa16.31■□□□□ 0.2
SMPD1-208ENST00000533123 PEX16Q9Y5Y5 336 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms