RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 IFT27Q9BW83 186 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 MAGIXQ9H6Y5 334 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 CHODLQ9H9P2 273 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 ELOVL3Q9HB03 270 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 SGCEO43556 437 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 DOK2O60496 412 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 LILRA1O75019 489 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 NCR1O76036 304 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 MPZL1O95297 269 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 CRABP1P29762 137 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 MAGEB1P43366 347 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 CHN2P52757 468 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 OTPQ5XKR4 325 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 LEG1Q6P5S2 330 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 DNM1P34Q6PK57 102 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 ARL9Q6T311 187 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 JAZF1Q86VZ6 243 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 LINC00471Q8N535 108 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 TSSK2Q96PF2 358 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 TRIM15Q9C019 465 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 OR2J1Q9GZK6 312 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 C1orf21Q9H246 121 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 TAS2R1Q9NYW7 299 aa25.88■■□□□ 1.73
SSSCA1-207ENST00000533115 LRP5LA4QPB2 252 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 NGFP01138 241 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 MT-ND5P03915 603 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 ACHEP22303 614 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 MPV17P39210 176 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 PPP1CBP62140 327 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 MRPS11P82912 194 aaKnown RBP25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 GLO1Q04760 184 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 KCNMB1Q16558 191 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 PCGF3Q3KNV8 242 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 MBNL2Q5VZF2 373 aaKnown RBP25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 ZNF620Q6ZNG0 422 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 VASH1Q7L8A9 365 aaPredicted RBP25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 KLF14Q8TD94 323 aaPredicted RBP25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 MSI2Q96DH6 328 aaKnown RBP25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 SNX18Q96RF0 628 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 TMEM160Q9NX00 188 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 NKIRAS2Q9NYR9 191 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 ASH2LQ9UBL3 628 aa25.87■■□□□ 1.73
SSSCA1-207ENST00000533115 DCTN6O00399 190 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 HIST1H1CP16403 213 aaKnown RBP25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 HTR5AP47898 357 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 ARHGDIAP52565 204 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 OR9Q2Q8NGE9 314 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 OR4C15Q8NGM1 316 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 IPCEF1Q8WWN9 437 aaPredicted RBP25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 POP5Q969H6 163 aaKnown RBP25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 YIPF5Q969M3 257 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 NMNAT3Q96T66 252 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 PLEK2Q9NYT0 353 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 B9D1Q9UPM9 204 aa25.86■■□□□ 1.73
SSSCA1-207ENST00000533115 LOC100289279A0A1B0GTE1 492 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 H3BSA7 217 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 IDH3BO43837 385 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 RENP00797 406 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 NOS3P29474 1203 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 CENPAP49450 140 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 CCL8P80075 99 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 TRIP10Q15642 601 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 CHRFAM7AQ494W8 412 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 FAM98BQ52LJ0 330 aaKnown RBP25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 FAM166AQ6J272 317 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 OR4K13Q8NH42 304 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 GTF3AQ92664 365 aaKnown RBP25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 HPS1Q92902 700 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 ASB9Q96DX5 294 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 BTBD10Q9BSF8 475 aa25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 SRA1Q9HD15 236 aaKnown RBP25.85■■□□□ 1.73
SSSCA1-207ENST00000533115 IGLV1-36A0A0B4J1U3 117 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 KIAA1324LA8MWY0 1029 aaPredicted RBP25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 LMX1BO60663 402 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 CCNB2O95067 398 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 ABHD16AO95870 558 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 GPANK1O95872 356 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 TMEM255AQ5JRV8 349 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 MALRD1Q5VYJ5 2156 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 PGM2L1Q6PCE3 622 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 OR6V1Q8N148 313 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 CLPTM1LQ96KA5 538 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 SOX7Q9BT81 388 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 EGLN3Q9H6Z9 239 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 ZNF275Q9NSD4 429 aaPredicted RBP25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 CDC42EP3Q9UKI2 254 aa25.84■■□□□ 1.73
SSSCA1-207ENST00000533115 GAAP10253 952 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 GPR6P46095 362 aaPredicted RBP25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 ZNF81P51508 661 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 MMP15P51511 669 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 TMEM33P57088 247 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 CCDC92Q53HC0 331 aaPredicted RBP25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 ZNF770Q6IQ21 691 aaPredicted RBP25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 RPL13AP3Q6NVV1 102 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 TRPM8Q7Z2W7 1104 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 BCAS4Q8TDM0 211 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 CCDC124Q96CT7 223 aaKnown RBP25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 RACGAP1Q9H0H5 632 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 RPRD1BQ9NQG5 326 aaKnown RBP25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 TBCCD1Q9NVR7 557 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms