RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 KITLGP21583 273 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 CD80P33681 288 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 ZMYND11Q15326 602 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 SLC9A3R2Q15599 337 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 AGBL2Q5U5Z8 902 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 NANOGP8Q6NSW7 305 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 LRRC75AQ8NAA5 344 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 NPEPL1Q8NDH3 523 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 OR2Z1Q8NG97 314 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 WACQ9BTA9 647 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 MS4A7Q9GZW8 240 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-219ENST00000530495 SLITRK2Q9H156 845 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 IL19Q9UHD0 177 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 NDRG4Q9ULP0 352 aaKnown RBP12.55□□□□□ -0.4
CAPN1-219ENST00000530495 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
CAPN1-219ENST00000530495 SHOX2O60902 331 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-219ENST00000530495 ABHD16AO95870 558 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 WNT2P09544 360 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 MSR1P21757 451 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 CPT2P23786 658 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 MDH2P40926 338 aaKnown RBP12.54□□□□□ -0.4
CAPN1-219ENST00000530495 OR1E2P47887 323 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 DEFA6Q01524 100 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 TOP3AQ13472 1001 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-219ENST00000530495 ESCO2Q56NI9 601 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 BEND6Q5SZJ8 279 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-219ENST00000530495 FAM205BPQ63HN1 556 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 CALHM3Q86XJ0 350 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 OR52E2Q8NGJ4 325 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 HAVCR1Q96D42 359 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 BPIFA2Q96DR5 249 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 SH3GL1Q99961 368 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 POFUT1Q9H488 388 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 IL20RAQ9UHF4 553 aa12.54□□□□□ -0.4
CAPN1-219ENST00000530495 A0A1W2PPL8 197 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 A6NIZ1 184 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 TMEM178BH3BS89 294 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 FBP2O00757 339 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 SURF4O15260 269 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 PIP5K1CO60331 668 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 IFNA14P01570 189 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 SCG5P05408 212 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 MTNR1AP48039 350 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 CTXN1P60606 82 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 RAP1BP61224 184 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 RAP1AP62834 184 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 PAX2Q02962 417 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 FHL1Q13642 323 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 CYLC2Q14093 348 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-219ENST00000530495 LEG1Q6P5S2 330 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-219ENST00000530495 ITLN1Q8WWA0 313 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 PTP4A1Q93096 173 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 POLE4Q9NR33 117 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 OR5V1Q9UGF6 321 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 STARD10Q9Y365 291 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 TGP01266 2768 aa12.53□□□□□ -0.4
CAPN1-219ENST00000530495 IFNL4K9M1U5 179 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 PLATP00750 562 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 IFI30P13284 250 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 ST3GAL3Q11203 375 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 RABL3Q5HYI8 236 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 LRRN1Q6UXK5 716 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 IGFN1Q86VF2 1251 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 UPRTQ96BW1 309 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
CAPN1-219ENST00000530495 COG8Q96MW5 612 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 OR2V2Q96R30 315 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 ECSITQ9BQ95 431 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 A4GNTQ9UNA3 340 aa12.52□□□□□ -0.41
CAPN1-219ENST00000530495 DOCK11Q5JSL3 2073 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 CEACAM18A8MTB9 384 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 SGCEO43556 437 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 IGHV4-38-2P0DP08 117 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 SCRN3Q0VDG4 424 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 OCLNQ16625 522 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 METTL21CQ5VZV1 264 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 C16orf87Q6PH81 154 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-219ENST00000530495 PARP8Q8N3A8 854 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 OR8J3Q8NGG0 315 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 OR51A7Q8NH64 312 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 DYDC1Q8WWB3 177 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPN1-219ENST00000530495 DACT3Q96B18 629 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-219ENST00000530495 TMIGD2Q96BF3 282 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 ZNF583Q96ND8 569 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 SSBP3Q9BWW4 388 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-219ENST00000530495 TMEM165Q9HC07 324 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 EMC7Q9NPA0 242 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 MMP24Q9Y5R2 645 aa12.51□□□□□ -0.41
CAPN1-219ENST00000530495 SOX21Q9Y651 276 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-219ENST00000530495 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
CAPN1-219ENST00000530495 AHCYL1O43865 530 aa12.5□□□□□ -0.41
CAPN1-219ENST00000530495 DOK2O60496 412 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms